Gm55601 Gene Detail

Summary

• Symbol
  Gm55601
• Name
  predicted gene, 55601

• Feature Type
  miRNA gene
• IDs
  MGI:6847670
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:135717995-135718099 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  87 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847670	miRNA gene	Chr6:135717995-135718099 (+)
129S1/SvImJ	ENSMUSG00200034385	miRNA gene	Chr6:133203064-133203168 (+)
A/J	ENSMUSG00195034312	miRNA gene	Chr6:132056178-132056282 (+)
AKR/J	ENSMUSG00220043784	miRNA gene	Chr6:130280616-130280720 (+)
BALB/cJ	ENSMUSG00180039319	miRNA gene	Chr6:132148856-132148960 (+)
C3H/HeJ	ENSMUSG00175035132	miRNA gene	Chr6:132076441-132076545 (+)
C57BL/6NJ	ENSMUSG00215037733	miRNA gene	Chr6:132340967-132341071 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005036747	miRNA gene	Chr6:133026555-133026659 (+)
CBA/J	ENSMUSG00210016874	miRNA gene	Chr6:132094842-132094946 (+)
DBA/2J	ENSMUSG00185023676	miRNA gene	Chr6:132791098-132791202 (+)
FVB/NJ	ENSMUSG00205038071	miRNA gene	Chr6:131229991-131230095 (+)
JF1/MsJ	ENSUMUG00000043998	miRNA gene	Chr6:131557403-131557507 (+)
LP/J	ENSMUSG00230009877	miRNA gene	Chr6:133998796-133998900 (+)
NOD/ShiLtJ	ENSMUSG00190007084	miRNA gene	Chr6:132629308-132629412 (+)
NZO/HlLtJ	ENSMUSG00225007615	miRNA gene	Chr6:136866031-136866135 (+)
PWK/PhJ	ENSLUMG00010044329	miRNA gene	Chr6:130610632-130610736 (+)
SPRET/EiJ	ENSMSPG00010035358	miRNA gene	Chr6:134418514-134418618 (+)
WSB/EiJ	ENSIUOG00005046508	miRNA gene	Chr6:132905738-132905842 (+)

Homology

• Gene Tree
  Gm55601
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076613 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076613	Ensembl Gene Model | MGI Sequence Detail	105	C57BL/6J
transcript	ENSMUST00020182123	Ensembl | MGI Sequence Detail	105	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;