Gm55597 Gene Detail

Summary

• Symbol
  Gm55597
• Name
  predicted gene, 55597

• Feature Type
  miRNA gene
• IDs
  MGI:6847662
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:73885306-73885412 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  47 from dbSNP Build 142
• Strain Annotations
  30

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847662	miRNA gene	Chr7:73885306-73885412 (+)
129S1/SvImJ	ENSMUSG00200012766	miRNA gene	Chr7:60663182-60663285 (+)
A/J	ENSMUSG00195037984	miRNA gene	ChrX:59532104-59532209 (-)
A/J	ENSMUSG00195001025	miRNA gene	Chr13:114316950-114317056 (-)
A/J	ENSMUSG00195015500	miRNA gene	Chr7:65061162-65061268 (+)
AKR/J	ENSMUSG00220044658	miRNA gene	Chr2:121662802-121662905 (+)
AKR/J	ENSMUSG00220035349	miRNA gene	Chr3:110447785-110447887 (-)
AKR/J	ENSMUSG00220021147	miRNA gene	Chr7:58606887-58606993 (+)
AKR/J	ENSMUSG00220012859	miRNA gene	Chr13:112768190-112768296 (-)
BALB/cJ	ENSMUSG00180011104	miRNA gene	Chr13:114918723-114918829 (-)
BALB/cJ	ENSMUSG00180013517	miRNA gene	Chr7:61766694-61766800 (+)
BALB/cJ	ENSMUSG00180032142	miRNA gene	Chr3:111983104-111983206 (-)
BALB/cJ	ENSMUSG00180050741	miRNA gene	Chr2:121691422-121691525 (+)
C3H/HeJ	ENSMUSG00175021851	miRNA gene	Chr7:62564265-62564368 (+)
C57BL/6NJ	ENSMUSG00215031341	miRNA gene	Chr7:61687366-61687472 (+)
C57BL/6NJ	ENSMUSG00215034362	miRNA gene	Chr2:121748037-121748140 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005004557	miRNA gene	Chr7:65188784-65188887 (+)
CBA/J	ENSMUSG00210024518	miRNA gene	Chr7:62422794-62422897 (+)
DBA/2J	ENSMUSG00185001492	miRNA gene	Chr7:66745573-66745676 (+)
FVB/NJ	ENSMUSG00205027977	miRNA gene	Chr7:62392714-62392817 (+)
JF1/MsJ	ENSUMUG00000032846	miRNA gene	Chr7:71481837-71481940 (+)
LP/J	ENSMUSG00230040389	miRNA gene	Chr2:123512295-123512398 (+)
LP/J	ENSMUSG00230037768	miRNA gene	ChrX:75356670-75356775 (+)
LP/J	ENSMUSG00230015917	miRNA gene	Chr7:72800358-72800464 (+)
NOD/ShiLtJ	ENSMUSG00190009769	miRNA gene	Chr13:114633279-114633385 (-)
NOD/ShiLtJ	ENSMUSG00190019654	miRNA gene	Chr7:62517742-62517848 (+)
NOD/ShiLtJ	ENSMUSG00190016526	miRNA gene	Chr2:121866692-121866795 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010017647	miRNA gene	Chr7:61037076-61037179 (+)
SPRET/EiJ	ENSMSPG00010041878	miRNA gene	Chr7:93723414-93723718 (+)
WSB/EiJ	ENSIUOG00005023730	miRNA gene	Chr7:62900068-62900171 (+)

Homology

• Gene Tree
  Gm55597
  

Sequences &
Gene Models

• All Sequences
  32

• Ensembl
  ENSMUSG00002075038 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075038	Ensembl Gene Model | MGI Sequence Detail	107	C57BL/6J
transcript	ENSMUST00020182761	Ensembl | MGI Sequence Detail	107	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;