Gm55596 Gene Detail

Summary

• Symbol
  Gm55596
• Name
  predicted gene, 55596

• Feature Type
  rRNA gene
• IDs
  MGI:6847660
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:79166363-79166481 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  59 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847660	rRNA gene	Chr17:79166363-79166481 (+)
129S1/SvImJ	ENSMUSG00200024986	rRNA gene	Chr17:74537156-74537274 (+)
A/J	ENSMUSG00195028955	rRNA gene	Chr17:75891544-75891662 (+)
AKR/J	ENSMUSG00220014039	rRNA gene	Chr17:74799154-74799272 (+)
BALB/cJ	ENSMUSG00180005071	rRNA gene	Chr17:75601313-75601431 (+)
C3H/HeJ	ENSMUSG00175016614	rRNA gene	Chr17:74879749-74879867 (+)
C57BL/6NJ	ENSMUSG00215016515	rRNA gene	Chr17:74591545-74591663 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034317	rRNA gene	Chr9:63030019-63030131 (+)
CAST/EiJ	ENSTCUG00005015422	rRNA gene	Chr17:75449464-75449582 (+)
CBA/J	ENSMUSG00210020719	rRNA gene	Chr17:74743144-74743262 (+)
DBA/2J	ENSMUSG00185012950	rRNA gene	Chr17:77576618-77576736 (+)
FVB/NJ	ENSMUSG00205030998	rRNA gene	Chr17:75357519-75357637 (+)
JF1/MsJ	ENSUMUG00000023135	rRNA gene	Chr17:77272067-77272185 (+)
LP/J	ENSMUSG00230022736	rRNA gene	Chr17:78578018-78578136 (+)
NOD/ShiLtJ	ENSMUSG00190009896	rRNA gene	Chr17:74641569-74641687 (+)
NZO/HlLtJ	ENSMUSG00225029187	rRNA gene	Chr17:80834147-80834265 (+)
PWK/PhJ	ENSLUMG00010005482	rRNA gene	Chr17:74516704-74516822 (+)
SPRET/EiJ	ENSMSPG00010008850	rRNA gene	Chr17:74984171-74984289 (+)
WSB/EiJ	ENSIUOG00005010902	rRNA gene	Chr17:75572227-75572345 (+)

Homology

• Gene Tree
  Gm55596
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000065387 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000065387	Ensembl Gene Model | MGI Sequence Detail	119	C57BL/6J
transcript	ENSMUST00000083453	Ensembl | MGI Sequence Detail	119	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;