Gm55586 Gene Detail

Summary

• Symbol
  Gm55586
• Name
  predicted gene, 55586

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6847640
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  ChrX:102513277-102513402 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  66 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847640	unclassified non-coding RNA gene	ChrX:102513277-102513402 (-)
129S1/SvImJ	ENSMUSG00200039040	unclassified non-coding RNA gene	ChrX:84278395-84278520 (-)
A/J	ENSMUSG00195040639	unclassified non-coding RNA gene	ChrX:88033114-88033239 (-)
AKR/J	ENSMUSG00220038284	unclassified non-coding RNA gene	ChrX:82700769-82700894 (-)
BALB/cJ	ENSMUSG00180042145	unclassified non-coding RNA gene	ChrX:84710385-84710510 (-)
C3H/HeJ	ENSMUSG00175046257	unclassified non-coding RNA gene	ChrX:88283244-88283369 (-)
C57BL/6NJ	ENSMUSG00215046246	unclassified non-coding RNA gene	ChrX:84890307-84890432 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005043226	unclassified non-coding RNA gene	ChrX:85753867-85753992 (-)
CBA/J	ENSMUSG00210046496	unclassified non-coding RNA gene	ChrX:85174060-85174185 (-)
DBA/2J	ENSMUSG00185045817	unclassified non-coding RNA gene	ChrX:97613264-97613389 (-)
FVB/NJ	ENSMUSG00205041785	unclassified non-coding RNA gene	ChrX:84255518-84255643 (-)
JF1/MsJ	ENSUMUG00000037984	unclassified non-coding RNA gene	ChrX:118221093-118221218 (-)
LP/J	ENSMUSG00230042530	unclassified non-coding RNA gene	ChrX:104311577-104311702 (-)
NOD/ShiLtJ	ENSMUSG00190037791	unclassified non-coding RNA gene	ChrX:84331872-84331997 (-)
NZO/HlLtJ	ENSMUSG00225045776	unclassified non-coding RNA gene	ChrX:109431897-109432022 (-)
PWK/PhJ	ENSLUMG00010037636	unclassified non-coding RNA gene	ChrX:83535735-83535860 (-)
SPRET/EiJ	ENSMSPG00010042751	unclassified non-coding RNA gene	ChrX:87739858-87739983 (-)
WSB/EiJ	ENSIUOG00005044157	unclassified non-coding RNA gene	ChrX:84835341-84835466 (-)

Homology

• Gene Tree
  Gm55586
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076282 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076282	Ensembl Gene Model | MGI Sequence Detail	126	C57BL/6J
transcript	ENSMUST00020182793	Ensembl | MGI Sequence Detail	126	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm55586:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr163944	ChrX:102513334-102513347 (-)	61 bp
Tssr163943	ChrX:102513301-102513313 (-)	95 bp