Gm55575 Gene Detail

Summary

• Symbol
  Gm55575
• Name
  predicted gene, 55575

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6847618
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr1:184590335-184590609 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  96 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847618	unclassified non-coding RNA gene	Chr1:184590335-184590609 (-)
129S1/SvImJ	ENSMUSG00200023617	unclassified non-coding RNA gene	Chr1:182377772-182378046 (-)
A/J	ENSMUSG00195043280	unclassified non-coding RNA gene	Chr1:181960677-181960951 (-)
AKR/J	ENSMUSG00220021245	unclassified non-coding RNA gene	Chr1:181176954-181177228 (-)
BALB/cJ	ENSMUSG00180037762	unclassified non-coding RNA gene	Chr1:182026871-182027145 (-)
C3H/HeJ	ENSMUSG00175041387	unclassified non-coding RNA gene	Chr1:182202313-182202587 (-)
C57BL/6NJ	ENSMUSG00215032386	unclassified non-coding RNA gene	Chr1:181405503-181405777 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005043206	unclassified non-coding RNA gene	Chr1:179965928-179966202 (-)
CBA/J	ENSMUSG00210019409	unclassified non-coding RNA gene	Chr1:181854296-181854570 (-)
DBA/2J	ENSMUSG00185037676	unclassified non-coding RNA gene	Chr1:186469000-186469274 (-)
FVB/NJ	ENSMUSG00205039046	unclassified non-coding RNA gene	Chr1:180895764-180896038 (-)
JF1/MsJ	ENSUMUG00000007201	unclassified non-coding RNA gene	Chr1:185471123-185471397 (-)
LP/J	ENSMUSG00230024795	unclassified non-coding RNA gene	Chr1:186034332-186034606 (-)
NOD/ShiLtJ	ENSMUSG00190036587	unclassified non-coding RNA gene	Chr1:181876669-181876943 (-)
NZO/HlLtJ	ENSMUSG00225011656	unclassified non-coding RNA gene	Chr1:189764171-189764445 (-)
PWK/PhJ	ENSLUMG00010017302	unclassified non-coding RNA gene	Chr1:180724695-180724969 (-)
SPRET/EiJ	ENSMSPG00010036350	unclassified non-coding RNA gene	Chr1:184225766-184226040 (-)
WSB/EiJ	ENSIUOG00005011705	unclassified non-coding RNA gene	Chr1:181064817-181065091 (-)

Homology

• Gene Tree
  Gm55575
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076207 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076207	Ensembl Gene Model | MGI Sequence Detail	275	C57BL/6J
transcript	ENSMUST00020182104	Ensembl | MGI Sequence Detail	275	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm55575:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr15660	Chr1:184590608-184590614 (-)	-2 bp