Gm55565 Gene Detail

Summary

• Symbol
  Gm55565
• Name
  predicted gene, 55565

• Feature Type
  miRNA gene
• IDs
  MGI:6847598
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:62614679-62614785 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  102 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847598	miRNA gene	Chr13:62614679-62614785 (+)
129S1/SvImJ	ENSMUSG00200017551	miRNA gene	Chr13:58742775-58742881 (+)
A/J	ENSMUSG00195044755	miRNA gene	Chr13:58899669-58899775 (+)
AKR/J	no annotation
BALB/cJ	ENSMUSG00180017366	miRNA gene	Chr13:59235502-59235608 (+)
C3H/HeJ	ENSMUSG00175046310	miRNA gene	Chr13:59022451-59022557 (+)
C57BL/6NJ	ENSMUSG00215040833	miRNA gene	Chr13:59024866-59024972 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005042635	miRNA gene	Chr13:59427756-59427862 (+)
CBA/J	ENSMUSG00210042397	miRNA gene	Chr13:59221964-59222070 (+)
DBA/2J	ENSMUSG00185017620	miRNA gene	Chr13:60070563-60070669 (+)
FVB/NJ	ENSMUSG00205047079	miRNA gene	Chr13:58224527-58224633 (+)
JF1/MsJ	ENSUMUG00000043834	miRNA gene	Chr13:59688625-59688731 (+)
JF1/MsJ	ENSUMUG00000036661	miRNA gene	Chr13:59393706-59393812 (-)
LP/J	ENSMUSG00230035851	miRNA gene	Chr13:69426787-69426893 (+)
NOD/ShiLtJ	ENSMUSG00190033674	miRNA gene	Chr13:58985360-58985466 (+)
NZO/HlLtJ	ENSMUSG00225047502	miRNA gene	Chr13:63121837-63121943 (+)
PWK/PhJ	ENSLUMG00010025731	miRNA gene	Chr13:58525627-58525733 (+)
PWK/PhJ	ENSLUMG00010024210	miRNA gene	Chr13:58224994-58225100 (-)
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm55565
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002075182 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075182	Ensembl Gene Model | MGI Sequence Detail	107	C57BL/6J
transcript	ENSMUST00020183745	Ensembl | MGI Sequence Detail	107	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;