Gm55564 Gene Detail

Summary

• Symbol
  Gm55564
• Name
  predicted gene, 55564

• Feature Type
  miRNA gene
• IDs
  MGI:6847596
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:62531051-62531158 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  119 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847596	miRNA gene	Chr13:62531051-62531158 (+)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195046202	miRNA gene	Chr13:58816888-58816995 (+)
AKR/J	ENSMUSG00220044754	miRNA gene	Chr13:57885897-57886004 (-)
BALB/cJ	ENSMUSG00180018534	miRNA gene	Chr13:59151885-59151992 (+)
C3H/HeJ	ENSMUSG00175042010	miRNA gene	Chr13:58938824-58938931 (+)
C57BL/6NJ	ENSMUSG00215039635	miRNA gene	Chr13:58941241-58941348 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005040825	miRNA gene	Chr13:59220817-59220924 (-)
CBA/J	ENSMUSG00210039756	miRNA gene	Chr13:59138336-59138443 (+)
DBA/2J	ENSMUSG00185017493	miRNA gene	Chr13:59986934-59987041 (+)
FVB/NJ	ENSMUSG00205046764	miRNA gene	Chr13:58140456-58140563 (+)
JF1/MsJ	ENSUMUG00000043866	miRNA gene	Chr13:59925476-59925583 (+)
JF1/MsJ	ENSUMUG00000039900	miRNA gene	Chr13:59470605-59470712 (-)
LP/J	ENSMUSG00230036408	miRNA gene	Chr13:69339096-69339203 (+)
NOD/ShiLtJ	ENSMUSG00190036188	miRNA gene	Chr13:58902127-58902234 (+)
NZO/HlLtJ	ENSMUSG00225047786	miRNA gene	Chr13:63038214-63038321 (+)
PWK/PhJ	ENSLUMG00010025734	miRNA gene	Chr13:58766268-58766375 (+)
PWK/PhJ	ENSLUMG00010024302	miRNA gene	Chr13:58310341-58310448 (-)
SPRET/EiJ	ENSMSPG00010044764	miRNA gene	Chr13:58842879-58941224 (+)
SPRET/EiJ	ENSMSPG00010043698	miRNA gene	Chr13:58453276-58453383 (-)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm55564
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00002075395 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075395	Ensembl Gene Model | MGI Sequence Detail	108	C57BL/6J
transcript	ENSMUST00020181708	Ensembl | MGI Sequence Detail	108	Not Applicable

References

• Summaries
  All 2

  Phenotypes 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;