Gm55563 Gene Detail

Summary

• Symbol
  Gm55563
• Name
  predicted gene, 55563

• Feature Type
  snoRNA gene
• IDs
  MGI:6847594
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:62284576-62284645 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  44 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847594	snoRNA gene	Chr13:62284576-62284645 (+)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195046269	snoRNA gene	Chr13:58546283-58546352 (+)
AKR/J	ENSMUSG00220044792	snoRNA gene	Chr13:58041105-58041174 (-)
BALB/cJ	ENSMUSG00180018592	snoRNA gene	Chr13:58902301-58902370 (+)
C3H/HeJ	ENSMUSG00175042166	snoRNA gene	Chr13:58692342-58692411 (+)
C57BL/6NJ	ENSMUSG00215039679	snoRNA gene	Chr13:58694757-58694826 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005040789	snoRNA gene	Chr13:58998642-58998711 (+)
CBA/J	ENSMUSG00210039950	snoRNA gene	Chr13:58891863-58891932 (+)
DBA/2J	ENSMUSG00185017536	snoRNA gene	Chr13:59740483-59740552 (+)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000039964	snoRNA gene	Chr13:59296964-59297033 (+)
LP/J	ENSMUSG00230036352	snoRNA gene	Chr13:69094752-69094821 (+)
NOD/ShiLtJ	ENSMUSG00190036349	snoRNA gene	Chr13:58660339-58660408 (+)
NZO/HlLtJ	ENSMUSG00225047726	snoRNA gene	Chr13:62791743-62791812 (+)
PWK/PhJ	ENSLUMG00010024332	snoRNA gene	Chr13:58116093-58116162 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005024199	snoRNA gene	Chr13:60707557-60707626 (+)

Homology

• Gene Tree
  Gm55563
  

Sequences &
Gene Models

• All Sequences
  17

• Ensembl
  ENSMUSG00002076126 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076126	Ensembl Gene Model | MGI Sequence Detail	70	C57BL/6J
transcript	ENSMUST00020182162	Ensembl | MGI Sequence Detail	70	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;