Gm55562 Gene Detail

Summary

• Symbol
  Gm55562
• Name
  predicted gene, 55562

• Feature Type
  miRNA gene
• IDs
  MGI:6847592
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:62160849-62160958 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  11 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847592	miRNA gene	Chr13:62160849-62160958 (-)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195047277	miRNA gene	Chr13:58438637-58438746 (-)
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	ENSMUSG00175045575	miRNA gene	Chr13:58568540-58568649 (-)
C57BL/6NJ	ENSMUSG00215040345	miRNA gene	Chr13:58570947-58571056 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210044747	miRNA gene	Chr13:58768053-58768162 (-)
DBA/2J	ENSMUSG00185018791	miRNA gene	Chr13:59616673-59616782 (-)
FVB/NJ	no annotation
JF1/MsJ	no annotation
LP/J	ENSMUSG00230036466	miRNA gene	Chr13:68988577-68988686 (-)
NOD/ShiLtJ	ENSMUSG00190035931	miRNA gene	Chr13:58554278-58554387 (-)
NZO/HlLtJ	ENSMUSG00225047908	miRNA gene	Chr13:62667951-62668060 (-)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010028283	miRNA gene	Chr13:22272908-22273017 (+)
SPRET/EiJ	ENSMSPG00010017969	miRNA gene	Chr8:24464265-24464374 (-)
SPRET/EiJ	ENSMSPG00010011761	miRNA gene	Chr13:31131716-31131825 (-)
SPRET/EiJ	ENSMSPG00010044328	miRNA gene	Chr13:58201249-58201358 (-)
SPRET/EiJ	ENSMSPG00010044729	miRNA gene	Chr13:58312309-58312418 (-)
SPRET/EiJ	ENSMSPG00010044107	miRNA gene	Chr11:54616101-54616210 (+)
SPRET/EiJ	ENSMSPG00010031079	miRNA gene	Chr2:145712749-145712858 (-)
SPRET/EiJ	ENSMSPG00010000438	miRNA gene	Chr6:78435270-78435379 (+)
SPRET/EiJ	ENSMSPG00010039596	miRNA gene	Chr9:37207641-37207750 (-)
SPRET/EiJ	ENSMSPG00010027178	miRNA gene	ChrX:3480148-3480257 (-)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm55562
  

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00002076676 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076676	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020183470	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;