Gm55561 Gene Detail

Summary

• Symbol
  Gm55561
• Name
  predicted gene, 55561

• Feature Type
  miRNA gene
• IDs
  MGI:6847590
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:61971358-61971478 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  120 from dbSNP Build 142
• Strain Annotations
  10

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847590	miRNA gene	Chr13:61971358-61971478 (-)
129S1/SvImJ	ENSMUSG00200017173	miRNA gene	Chr13:58758884-58759024 (+)
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	ENSMUSG00175046644	miRNA gene	Chr13:58373669-58373789 (-)
C57BL/6NJ	ENSMUSG00215040282	miRNA gene	Chr13:58381404-58381524 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005042474	miRNA gene	Chr13:58822997-58823006 (-)
CBA/J	ENSMUSG00210044179	miRNA gene	Chr13:58578518-58578638 (-)
DBA/2J	ENSMUSG00185017991	miRNA gene	Chr13:59427145-59427265 (-)
FVB/NJ	no annotation
JF1/MsJ	no annotation
LP/J	ENSMUSG00230036132	miRNA gene	Chr13:68799298-68799418 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225047602	miRNA gene	Chr13:62478445-62478565 (-)
PWK/PhJ	ENSLUMG00010025102	miRNA gene	Chr13:57834586-57834595 (-)
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm55561
  

Sequences &
Gene Models

• All Sequences
  12

• Ensembl
  ENSMUSG00002076605 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076605	Ensembl Gene Model | MGI Sequence Detail	121	C57BL/6J
transcript	ENSMUST00020182150	Ensembl | MGI Sequence Detail	121	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;