Gm55560 Gene Detail

Summary

• Symbol
  Gm55560
• Name
  predicted gene, 55560

• Feature Type
  miRNA gene
• IDs
  MGI:6847588
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:61951955-61952062 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  65 from dbSNP Build 142
• Strain Annotations
  22

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847588	miRNA gene	Chr13:61951955-61952062 (-)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195046409	miRNA gene	Chr13:58441390-58441497 (-)
A/J	ENSMUSG00195046421	miRNA gene	Chr13:58628635-58628741 (-)
AKR/J	no annotation
BALB/cJ	ENSMUSG00180018345	miRNA gene	Chr13:58984935-58985041 (-)
C3H/HeJ	ENSMUSG00175047135	miRNA gene	Chr13:59114234-59114341 (+)
C3H/HeJ	ENSMUSG00175046573	miRNA gene	Chr13:58354290-58354397 (-)
C57BL/6NJ	ENSMUSG00215041617	miRNA gene	Chr13:59116651-59116758 (+)
C57BL/6NJ	ENSMUSG00215040243	miRNA gene	Chr13:58362003-58362110 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005042423	miRNA gene	Chr13:58991619-58991726 (-)
CBA/J	ENSMUSG00210045068	miRNA gene	Chr13:59313746-59313853 (+)
CBA/J	ENSMUSG00210044083	miRNA gene	Chr13:58559146-58559253 (-)
DBA/2J	ENSMUSG00185018985	miRNA gene	Chr13:60162342-60162449 (+)
DBA/2J	ENSMUSG00185017960	miRNA gene	Chr13:59407750-59407857 (-)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000041750	miRNA gene	Chr13:58854044-58854151 (-)
JF1/MsJ	ENSUMUG00000041767	miRNA gene	Chr13:59289969-59290076 (-)
LP/J	ENSMUSG00230036484	miRNA gene	Chr13:68779902-68780009 (-)
NOD/ShiLtJ	ENSMUSG00190038088	miRNA gene	Chr13:58743008-58743114 (-)
NZO/HlLtJ	ENSMUSG00225048617	miRNA gene	Chr13:63213617-63213724 (+)
NZO/HlLtJ	ENSMUSG00225047699	miRNA gene	Chr13:62459046-62459153 (-)
PWK/PhJ	ENSLUMG00010025063	miRNA gene	Chr13:58109110-58109217 (-)
SPRET/EiJ	ENSMSPG00010044012	miRNA gene	Chr13:58095472-58095579 (-)
WSB/EiJ	ENSIUOG00005023711	miRNA gene	Chr13:60790188-60790294 (-)

Homology

• Gene Tree
  Gm55560
  

Sequences &
Gene Models

• All Sequences
  24

• Ensembl
  ENSMUSG00002076825 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076825	Ensembl Gene Model | MGI Sequence Detail	108	C57BL/6J
transcript	ENSMUST00020183507	Ensembl | MGI Sequence Detail	108	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;