Gm55551 Gene Detail

Summary

• Symbol
  Gm55551
• Name
  predicted gene, 55551

• Feature Type
  miRNA gene
• IDs
  MGI:6847571
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:61484269-61484375 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  67 from dbSNP Build 142
• Strain Annotations
  27

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847571	miRNA gene	Chr13:61484269-61484375 (+)
129S1/SvImJ	ENSMUSG00200017443	miRNA gene	Chr13:58428813-58428919 (+)
129S1/SvImJ	ENSMUSG00200008422	miRNA gene	Chr8:39405214-39405315 (-)
A/J	ENSMUSG00195045129	miRNA gene	Chr13:57899047-57899153 (+)
AKR/J	ENSMUSG00220043099	miRNA gene	Chr13:57408450-57408556 (+)
BALB/cJ	ENSMUSG00180017121	miRNA gene	Chr13:58100377-58100483 (+)
BALB/cJ	ENSMUSG00180003496	miRNA gene	Chr8:39431320-39431421 (-)
C3H/HeJ	ENSMUSG00175015519	miRNA gene	Chr8:39555633-39555734 (-)
C3H/HeJ	ENSMUSG00175043080	miRNA gene	Chr13:57886568-57886674 (+)
C57BL/6NJ	ENSMUSG00215040544	miRNA gene	Chr13:57894287-57894393 (+)
C57BL/6NJ	ENSMUSG00215010239	miRNA gene	Chr8:39369821-39369922 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005007642	miRNA gene	Chr9:9250698-9250804 (-)
CAST/EiJ	ENSTCUG00005042280	miRNA gene	Chr13:58278517-58278623 (+)
CAST/EiJ	ENSTCUG00005033366	miRNA gene	Chr16:5801348-5801452 (+)
CAST/EiJ	ENSTCUG00005006074	miRNA gene	Chr8:35376830-35376931 (-)
CBA/J	ENSMUSG00210040741	miRNA gene	Chr13:58091426-58091532 (+)
CBA/J	ENSMUSG00210012890	miRNA gene	Chr8:39451752-39451853 (-)
DBA/2J	ENSMUSG00185006353	miRNA gene	Chr8:45305149-45305250 (-)
DBA/2J	ENSMUSG00185017678	miRNA gene	Chr13:58940064-58940170 (+)
FVB/NJ	ENSMUSG00205043026	miRNA gene	Chr13:57672364-57672470 (+)
JF1/MsJ	ENSUMUG00000035417	miRNA gene	Chr13:58297362-58297468 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190016390	miRNA gene	Chr8:39477433-39477534 (-)
NOD/ShiLtJ	ENSMUSG00190038510	miRNA gene	Chr13:57946749-57946855 (+)
NZO/HlLtJ	ENSMUSG00225012183	miRNA gene	Chr8:52601096-52601197 (-)
NZO/HlLtJ	ENSMUSG00225047846	miRNA gene	Chr13:61990529-61990635 (+)
PWK/PhJ	ENSLUMG00010023511	miRNA gene	Chr13:57222323-57222429 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005025864	miRNA gene	Chr13:57444129-57444190 (+)

Homology

• Gene Tree
  Gm55551
  

Sequences &
Gene Models

• All Sequences
  29

• Ensembl
  ENSMUSG00002076643 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076643	Ensembl Gene Model | MGI Sequence Detail	107	C57BL/6J
transcript	ENSMUST00020182525	Ensembl | MGI Sequence Detail	107	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;