Gm55550 Gene Detail

Summary

• Symbol
  Gm55550
• Name
  predicted gene, 55550

• Feature Type
  miRNA gene
• IDs
  MGI:6847569
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:29395750-29395834 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  3 from dbSNP Build 142
• Strain Annotations
  9

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847569	miRNA gene	ChrX:29395750-29395834 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005033688	miRNA gene	ChrX:20862602-20862686 (-)
CBA/J	no annotation
DBA/2J	ENSMUSG00185033175	miRNA gene	ChrX:28123328-28123412 (+)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000028959	miRNA gene	ChrX:40292741-40292825 (-)
LP/J	ENSMUSG00230013989	miRNA gene	ChrX:32770676-32770760 (+)
NOD/ShiLtJ	ENSMUSG00190035703	miRNA gene	ChrX:36805291-36805332 (+)
NZO/HlLtJ	ENSMUSG00225041517	miRNA gene	ChrX:38037564-38037648 (+)
PWK/PhJ	ENSLUMG00010016457	miRNA gene	ChrX:18800389-18800473 (+)
SPRET/EiJ	ENSMSPG00010010816	miRNA gene	ChrX:20099804-20099920 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm55550
  

Sequences &
Gene Models

• All Sequences
  11

• Ensembl
  ENSMUSG00002076641 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076641	Ensembl Gene Model | MGI Sequence Detail	85	C57BL/6J
transcript	ENSMUST00020181976	Ensembl | MGI Sequence Detail	85	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;