Gm55546 Gene Detail

Summary

• Symbol
  Gm55546
• Name
  predicted gene, 55546

• Feature Type
  snRNA gene
• IDs
  MGI:6847561
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:57507029-57507185 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  121 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847561	snRNA gene	Chr1:57507029-57507185 (+)
129S1/SvImJ	ENSMUSG00200018945	snRNA gene	Chr1:55009875-55010031 (+)
A/J	ENSMUSG00195031829	snRNA gene	Chr1:54543383-54543539 (+)
AKR/J	ENSMUSG00220041232	snRNA gene	Chr1:54633554-54633710 (+)
BALB/cJ	ENSMUSG00180014204	snRNA gene	Chr1:54791037-54791193 (+)
C3H/HeJ	ENSMUSG00175001230	snRNA gene	Chr1:54920979-54921135 (+)
C57BL/6NJ	ENSMUSG00215037059	snRNA gene	Chr1:54852704-54852860 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005013603	snRNA gene	Chr1:54713970-54714126 (+)
CBA/J	ENSMUSG00210054097	snRNA gene	Chr1:54601794-54601950 (+)
DBA/2J	ENSMUSG00185055590	snRNA gene	Chr1:55721445-55721601 (+)
FVB/NJ	ENSMUSG00205021828	snRNA gene	Chr1:54566742-54566898 (+)
JF1/MsJ	ENSUMUG00000048600	snRNA gene	Chr1:54677103-54677259 (+)
LP/J	ENSMUSG00230030524	snRNA gene	Chr1:55732003-55732159 (+)
NOD/ShiLtJ	ENSMUSG00190041336	snRNA gene	Chr1:54777343-54777499 (+)
NZO/HlLtJ	ENSMUSG00225009276	snRNA gene	Chr1:58928714-58928870 (+)
PWK/PhJ	ENSLUMG00010025397	snRNA gene	Chr1:54217009-54217165 (+)
SPRET/EiJ	ENSMSPG00010027480	snRNA gene	Chr1:56056498-56056637 (+)
WSB/EiJ	ENSIUOG00005020458	snRNA gene	Chr1:54395486-54395642 (+)

Homology

• Gene Tree
  Gm55546
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076848 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076848	Ensembl Gene Model | MGI Sequence Detail	157	C57BL/6J
transcript	ENSMUST00020183657	Ensembl | MGI Sequence Detail	157	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;