Gm55543 Gene Detail

Summary

• Symbol
  Gm55543
• Name
  predicted gene, 55543

• Feature Type
  miRNA gene
• IDs
  MGI:6847555
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:93639760-93639817 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  132 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847555	miRNA gene	Chr8:93639760-93639817 (-)
129S1/SvImJ	ENSMUSG00200017883	miRNA gene	Chr8:88001050-88001107 (-)
A/J	ENSMUSG00195030260	miRNA gene	Chr8:88369228-88369285 (-)
AKR/J	ENSMUSG00220039996	miRNA gene	Chr8:88372167-88372224 (-)
BALB/cJ	ENSMUSG00180025990	miRNA gene	Chr8:88197485-88197542 (-)
C3H/HeJ	ENSMUSG00175028955	miRNA gene	Chr8:88307431-88307488 (-)
C57BL/6NJ	ENSMUSG00215035289	miRNA gene	Chr8:87910131-87910188 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005017744	miRNA gene	Chr8:87778537-87778594 (-)
CBA/J	ENSMUSG00210041168	miRNA gene	Chr8:88247165-88247222 (-)
DBA/2J	ENSMUSG00185024904	miRNA gene	Chr8:94355916-94355973 (-)
FVB/NJ	ENSMUSG00205019456	miRNA gene	Chr8:87327023-87327080 (-)
JF1/MsJ	ENSUMUG00000047488	miRNA gene	Chr8:96709637-96709694 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190017428	miRNA gene	Chr8:88349854-88349911 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010043231	miRNA gene	Chr8:88037829-88037886 (-)
SPRET/EiJ	ENSMSPG00010032304	miRNA gene	Chr8:90011612-90011669 (-)
WSB/EiJ	ENSIUOG00005021687	miRNA gene	Chr8:89081115-89081172 (-)

Homology

• Gene Tree
  Gm55543
  

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00002076561 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076561	Ensembl Gene Model | MGI Sequence Detail	58	C57BL/6J
transcript	ENSMUST00020183333	Ensembl | MGI Sequence Detail	58	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;