Gm55541 Gene Detail

Summary

• Symbol
  Gm55541
• Name
  predicted gene, 55541

• Feature Type
  miRNA gene
• IDs
  MGI:6847551
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:78610090-78610175 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  131 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847551	miRNA gene	Chr17:78610090-78610175 (+)
129S1/SvImJ	ENSMUSG00200024730	miRNA gene	Chr17:73987607-73987692 (+)
A/J	ENSMUSG00195028937	miRNA gene	Chr17:75336265-75336350 (+)
AKR/J	ENSMUSG00220013954	miRNA gene	Chr17:74248589-74248674 (+)
BALB/cJ	ENSMUSG00180005195	miRNA gene	Chr17:75046160-75046245 (+)
C3H/HeJ	ENSMUSG00175016258	miRNA gene	Chr17:74326909-74326992 (+)
C57BL/6NJ	ENSMUSG00215016470	miRNA gene	Chr17:74034418-74034503 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015455	miRNA gene	Chr17:74888406-74888479 (+)
CBA/J	ENSMUSG00210021162	miRNA gene	Chr17:74190276-74190359 (+)
DBA/2J	ENSMUSG00185012884	miRNA gene	Chr17:77023672-77023755 (+)
FVB/NJ	ENSMUSG00205030294	miRNA gene	Chr17:74807998-74808083 (+)
JF1/MsJ	ENSUMUG00000025042	miRNA gene	Chr17:76718840-76718923 (+)
LP/J	ENSMUSG00230022528	miRNA gene	Chr17:78028532-78028617 (+)
NOD/ShiLtJ	ENSMUSG00190010516	miRNA gene	Chr17:74091731-74091816 (+)
NZO/HlLtJ	ENSMUSG00225029013	miRNA gene	Chr17:80285950-80286035 (+)
PWK/PhJ	ENSLUMG00010005804	miRNA gene	Chr17:73949416-73949499 (+)
SPRET/EiJ	ENSMSPG00010008684	miRNA gene	Chr17:74420227-74420302 (+)
WSB/EiJ	ENSIUOG00005010835	miRNA gene	Chr17:75006000-75006101 (+)

Homology

• Gene Tree
  Gm55541
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075030 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075030	Ensembl Gene Model | MGI Sequence Detail	86	C57BL/6J
transcript	ENSMUST00020181685	Ensembl | MGI Sequence Detail	86	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;