Gm55540 Gene Detail

Summary

• Symbol
  Gm55540
• Name
  predicted gene, 55540

• Feature Type
  rRNA gene
• IDs
  MGI:6847549
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:96377185-96377266 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  142 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847549	rRNA gene	Chr9:96377185-96377266 (-)
129S1/SvImJ	ENSMUSG00200017066	rRNA gene	Chr9:93492556-93492637 (-)
A/J	ENSMUSG00195018795	rRNA gene	Chr9:92760155-92760236 (-)
AKR/J	ENSMUSG00220041940	rRNA gene	Chr9:93113096-93113177 (-)
BALB/cJ	ENSMUSG00180023878	rRNA gene	Chr9:93079750-93079831 (-)
C3H/HeJ	ENSMUSG00175013579	rRNA gene	Chr9:93419694-93419775 (-)
C57BL/6NJ	ENSMUSG00215022982	rRNA gene	Chr9:93393299-93393380 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005013757	rRNA gene	Chr9:93247067-93247148 (-)
CBA/J	ENSMUSG00210015377	rRNA gene	Chr9:93261704-93261785 (-)
DBA/2J	ENSMUSG00185012024	rRNA gene	Chr9:93447816-93447897 (-)
FVB/NJ	ENSMUSG00205025482	rRNA gene	Chr9:93452658-93452739 (-)
JF1/MsJ	ENSUMUG00000042123	rRNA gene	Chr9:93159750-93159831 (-)
LP/J	ENSMUSG00230021153	rRNA gene	Chr9:93616128-93616209 (-)
NOD/ShiLtJ	ENSMUSG00190041746	rRNA gene	Chr9:93079876-93079957 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010027460	rRNA gene	Chr9:93155358-93155439 (-)
SPRET/EiJ	ENSMSPG00010003929	rRNA gene	Chr9:94962490-94962571 (-)
WSB/EiJ	ENSIUOG00005024666	rRNA gene	Chr9:92521108-92521189 (-)

Homology

• Gene Tree
  Gm55540
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002075467 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075467	Ensembl Gene Model | MGI Sequence Detail	82	C57BL/6J
transcript	ENSMUST00020183097	Ensembl | MGI Sequence Detail	82	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;