Gm55536 Gene Detail

Summary

• Symbol
  Gm55536
• Name
  predicted gene, 55536

• Feature Type
  miRNA gene
• IDs
  MGI:6847541
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:57038314-57038434 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  112 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847541	miRNA gene	Chr1:57038314-57038434 (-)
129S1/SvImJ	ENSMUSG00200018820	miRNA gene	Chr1:54532957-54533077 (-)
A/J	ENSMUSG00195030428	miRNA gene	Chr1:54074283-54074403 (-)
AKR/J	ENSMUSG00220042304	miRNA gene	Chr1:54155865-54155985 (-)
BALB/cJ	ENSMUSG00180014238	miRNA gene	Chr1:54313387-54313507 (-)
C3H/HeJ	ENSMUSG00175001252	miRNA gene	Chr1:54451912-54452032 (-)
C57BL/6NJ	ENSMUSG00215032894	miRNA gene	Chr1:54383631-54383751 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005014051	miRNA gene	Chr1:54251778-54251898 (-)
CBA/J	ENSMUSG00210054082	miRNA gene	Chr1:54132725-54132845 (-)
DBA/2J	ENSMUSG00185054944	miRNA gene	Chr1:55252354-55252474 (-)
FVB/NJ	ENSMUSG00205024854	miRNA gene	Chr1:54097631-54097751 (-)
JF1/MsJ	ENSUMUG00000045948	miRNA gene	Chr1:54209602-54209722 (-)
LP/J	ENSMUSG00230029056	miRNA gene	Chr1:55262983-55263103 (-)
NOD/ShiLtJ	ENSMUSG00190039361	miRNA gene	Chr1:54298253-54298373 (-)
NZO/HlLtJ	ENSMUSG00225009589	miRNA gene	Chr1:58459682-58459802 (-)
PWK/PhJ	ENSLUMG00010026638	miRNA gene	Chr1:53739207-53739327 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005021431	miRNA gene	Chr1:53919065-53919185 (-)

Homology

• Gene Tree
  Gm55536
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002075847 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075847	Ensembl Gene Model | MGI Sequence Detail	121	C57BL/6J
transcript	ENSMUST00020181782	Ensembl | MGI Sequence Detail	121	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;