Gm55535 Gene Detail

Summary

• Symbol
  Gm55535
• Name
  predicted gene, 55535

• Feature Type
  miRNA gene
• IDs
  MGI:6847539
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:109162630-109162712 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  133 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847539	miRNA gene	Chr10:109162630-109162712 (-)
129S1/SvImJ	ENSMUSG00200011097	miRNA gene	Chr10:105576538-105576620 (-)
A/J	ENSMUSG00195009013	miRNA gene	Chr10:105991136-105991221 (-)
AKR/J	ENSMUSG00220025327	miRNA gene	Chr10:105567341-105567426 (-)
BALB/cJ	ENSMUSG00180026355	miRNA gene	Chr10:106004103-106004185 (-)
C3H/HeJ	ENSMUSG00175016382	miRNA gene	Chr10:105940076-105940158 (-)
C57BL/6NJ	ENSMUSG00215012079	miRNA gene	Chr10:105662247-105662329 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005011662	miRNA gene	Chr10:105067113-105067201 (-)
CBA/J	ENSMUSG00210011604	miRNA gene	Chr10:105811437-105811522 (-)
DBA/2J	ENSMUSG00185025375	miRNA gene	Chr10:105933504-105933586 (-)
FVB/NJ	ENSMUSG00205010789	miRNA gene	Chr10:105444150-105444232 (-)
JF1/MsJ	ENSUMUG00000011864	miRNA gene	Chr10:107291982-107292061 (-)
LP/J	ENSMUSG00230013086	miRNA gene	Chr10:107886138-107886220 (-)
NOD/ShiLtJ	ENSMUSG00190021964	miRNA gene	Chr10:106042270-106042352 (-)
NZO/HlLtJ	ENSMUSG00225041090	miRNA gene	Chr10:112142255-112142337 (-)
PWK/PhJ	ENSLUMG00010014485	miRNA gene	Chr10:105669140-105669219 (-)
SPRET/EiJ	ENSMSPG00010006085	miRNA gene	Chr10:107503517-107503599 (-)
WSB/EiJ	ENSIUOG00005010801	miRNA gene	Chr10:105739034-105739113 (-)

Homology

• Gene Tree
  Gm55535
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075046 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075046	Ensembl Gene Model | MGI Sequence Detail	83	C57BL/6J
transcript	ENSMUST00020182775	Ensembl | MGI Sequence Detail	83	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;