Gm55530 Gene Detail

Summary

• Symbol
  Gm55530
• Name
  predicted gene, 55530

• Feature Type
  miRNA gene
• IDs
  MGI:6847529
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:3375023-3375115 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  110 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847529	miRNA gene	Chr10:3375023-3375115 (+)
129S1/SvImJ	ENSMUSG00200010935	miRNA gene	Chr10:331764-331991 (+)
A/J	ENSMUSG00195010021	miRNA gene	Chr10:306680-306911 (+)
AKR/J	ENSMUSG00220007608	miRNA gene	Chr10:341926-342155 (+)
BALB/cJ	ENSMUSG00180025326	miRNA gene	Chr10:400996-401223 (+)
C3H/HeJ	ENSMUSG00175012910	miRNA gene	Chr10:365416-365957 (+)
C57BL/6NJ	ENSMUSG00215005177	miRNA gene	Chr10:309889-309981 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005018420	miRNA gene	Chr10:381914-382451 (+)
CBA/J	ENSMUSG00210012558	miRNA gene	Chr10:313870-314411 (+)
DBA/2J	ENSMUSG00185010281	miRNA gene	Chr10:371878-372419 (+)
FVB/NJ	ENSMUSG00205009100	miRNA gene	Chr10:346135-346674 (+)
JF1/MsJ	ENSUMUG00000036181	miRNA gene	Chr10:519065-519576 (+)
LP/J	ENSMUSG00230017446	miRNA gene	Chr10:2000145-2000372 (+)
NOD/ShiLtJ	ENSMUSG00190025585	miRNA gene	Chr10:313872-314415 (+)
NZO/HlLtJ	ENSMUSG00225013769	miRNA gene	Chr10:6499798-6500339 (+)
PWK/PhJ	ENSLUMG00010021769	miRNA gene	Chr10:370041-370546 (+)
SPRET/EiJ	ENSMSPG00010007044	miRNA gene	Chr10:524504-525006 (+)
WSB/EiJ	ENSIUOG00005013970	miRNA gene	Chr10:360183-360718 (+)

Homology

• Gene Tree
  Gm55530
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076446 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076446	Ensembl Gene Model | MGI Sequence Detail	93	C57BL/6J
transcript	ENSMUST00020182177	Ensembl | MGI Sequence Detail	93	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;