Gm55528 Gene Detail

Summary

• Symbol
  Gm55528
• Name
  predicted gene, 55528

• Feature Type
  miRNA gene
• IDs
  MGI:6847525
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:60441486-60441586 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  118 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847525	miRNA gene	Chr13:60441486-60441586 (+)
129S1/SvImJ	ENSMUSG00200017178	miRNA gene	Chr13:57345908-57346008 (+)
A/J	ENSMUSG00195046104	miRNA gene	Chr13:56812208-56812306 (+)
AKR/J	ENSMUSG00220044568	miRNA gene	Chr13:56344017-56344117 (+)
BALB/cJ	ENSMUSG00180017969	miRNA gene	Chr13:57049530-57049628 (+)
C3H/HeJ	ENSMUSG00175043721	miRNA gene	Chr13:56841532-56841632 (+)
C57BL/6NJ	ENSMUSG00215039785	miRNA gene	Chr13:56849180-56849280 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210044223	miRNA gene	Chr13:57046396-57046496 (+)
DBA/2J	ENSMUSG00185018129	miRNA gene	Chr13:57889451-57889551 (+)
FVB/NJ	ENSMUSG00205046424	miRNA gene	Chr13:56653314-56653412 (+)
JF1/MsJ	ENSUMUG00000037440	miRNA gene	Chr13:57248253-57248371 (+)
LP/J	ENSMUSG00230034392	miRNA gene	Chr13:67256581-67256679 (+)
NOD/ShiLtJ	ENSMUSG00190039053	miRNA gene	Chr13:56894160-56894278 (+)
NZO/HlLtJ	ENSMUSG00225034836	miRNA gene	Chr13:60945544-60945644 (+)
PWK/PhJ	ENSLUMG00010023186	miRNA gene	Chr13:56173644-56173764 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005027396	miRNA gene	Chr13:56362721-56362819 (+)

Homology

• Gene Tree
  Gm55528
  

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00002076571 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076571	Ensembl Gene Model | MGI Sequence Detail	101	C57BL/6J
transcript	ENSMUST00020181822	Ensembl | MGI Sequence Detail	101	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;