Gm55519 Gene Detail

Summary

• Symbol
  Gm55519
• Name
  predicted gene, 55519

• Feature Type
  miRNA gene
• IDs
  MGI:6847507
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:26535177-26535282 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  9 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847507	miRNA gene	ChrX:26535177-26535282 (-)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195007497	miRNA gene	ChrX:19257692-19257797 (-)
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005005612	miRNA gene	Chr18:81168783-81168888 (+)
CAST/EiJ	ENSTCUG00005013627	miRNA gene	Chr1:133866291-133866396 (+)
CAST/EiJ	ENSTCUG00005044106	miRNA gene	ChrX:88576506-88576611 (+)
CAST/EiJ	ENSTCUG00005027245	miRNA gene	ChrX:19728106-19728211 (+)
CBA/J	ENSMUSG00210020908	miRNA gene	ChrX:19562231-19562336 (-)
DBA/2J	ENSMUSG00185032988	miRNA gene	ChrX:27495514-27495619 (-)
DBA/2J	ENSMUSG00185019396	miRNA gene	Chr13:78542229-78542334 (+)
FVB/NJ	ENSMUSG00205026318	miRNA gene	ChrX:10713555-10713657 (+)
JF1/MsJ	ENSUMUG00000029358	miRNA gene	ChrX:46306550-46306655 (+)
JF1/MsJ	ENSUMUG00000031165	miRNA gene	ChrX:48314302-48314407 (+)
LP/J	ENSMUSG00230028201	miRNA gene	Chr13:88523517-88523622 (+)
LP/J	ENSMUSG00230014036	miRNA gene	ChrX:32149679-32149784 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225028609	miRNA gene	Chr13:81041256-81041361 (+)
NZO/HlLtJ	ENSMUSG00225041556	miRNA gene	ChrX:37416517-37416622 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005018025	miRNA gene	Chr13:74137961-74138066 (+)

Homology

• Gene Tree
  Gm55519
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002076659 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076659	Ensembl Gene Model | MGI Sequence Detail	106	C57BL/6J
transcript	ENSMUST00020183416	Ensembl | MGI Sequence Detail	106	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;