Gm55517 Gene Detail

Summary

• Symbol
  Gm55517
• Name
  predicted gene, 55517

• Feature Type
  miRNA gene
• IDs
  MGI:6847503
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:25634715-25634820 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  6 from dbSNP Build 142
• Strain Annotations
  28

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847503	miRNA gene	ChrX:25634715-25634820 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	ENSMUSG00185033416	miRNA gene	ChrX:26408632-26408736 (-)
DBA/2J	ENSMUSG00185033610	miRNA gene	ChrX:27723369-27723673 (-)
DBA/2J	ENSMUSG00185033397	miRNA gene	ChrX:26159158-26159262 (-)
DBA/2J	ENSMUSG00185032641	miRNA gene	ChrX:26595070-26595175 (-)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000028007	miRNA gene	ChrX:41897763-41897868 (-)
JF1/MsJ	ENSUMUG00000031400	miRNA gene	ChrX:45233642-45233747 (-)
JF1/MsJ	ENSUMUG00000031652	miRNA gene	ChrX:48314102-48314207 (+)
JF1/MsJ	ENSUMUG00000031694	miRNA gene	ChrX:39363767-39363872 (-)
LP/J	ENSMUSG00230014005	miRNA gene	ChrX:31249323-31249428 (-)
LP/J	ENSMUSG00230015152	miRNA gene	ChrX:32370735-32371039 (-)
LP/J	ENSMUSG00230015084	miRNA gene	ChrX:30739540-30739644 (-)
LP/J	ENSMUSG00230015091	miRNA gene	ChrX:30989011-30989115 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225041538	miRNA gene	ChrX:36516105-36516210 (-)
NZO/HlLtJ	ENSMUSG00225041677	miRNA gene	ChrX:37637603-37637907 (-)
NZO/HlLtJ	ENSMUSG00225041638	miRNA gene	ChrX:36255781-36255885 (-)
NZO/HlLtJ	ENSMUSG00225041634	miRNA gene	ChrX:35972585-35972689 (-)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010052169	miRNA gene	Chr2:87813249-87813354 (-)
SPRET/EiJ	ENSMSPG00010027830	miRNA gene	Chr1:194154989-194155094 (+)
SPRET/EiJ	ENSMSPG00010030510	miRNA gene	Chr4:108683147-108683250 (-)
SPRET/EiJ	ENSMSPG00010021602	miRNA gene	Chr6:20623917-20624022 (-)
SPRET/EiJ	ENSMSPG00010009015	miRNA gene	Chr6:54516655-54516760 (-)
SPRET/EiJ	ENSMSPG00010006660	miRNA gene	Chr8:94146432-94146532 (+)
SPRET/EiJ	ENSMSPG00010002208	miRNA gene	Chr9:20880120-20880223 (+)
SPRET/EiJ	ENSMSPG00010004710	miRNA gene	ChrX:49821338-49821441 (+)
SPRET/EiJ	ENSMSPG00010001069	miRNA gene	Chr15:17141138-17141241 (-)
SPRET/EiJ	ENSMSPG00010003048	miRNA gene	Chr14:33532527-33532632 (+)
SPRET/EiJ	ENSMSPG00010012697	miRNA gene	Chr7:72055723-72056027 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm55517
  

Sequences &
Gene Models

• All Sequences
  30

• Ensembl
  ENSMUSG00002075493 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075493	Ensembl Gene Model | MGI Sequence Detail	106	C57BL/6J
transcript	ENSMUST00020181778	Ensembl | MGI Sequence Detail	106	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;