Gm55501 Gene Detail

Summary

• Symbol
  Gm55501
• Name
  predicted gene, 55501

• Feature Type
  miRNA gene
• IDs
  MGI:6847471
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:44359840-44359893 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  143 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847471	miRNA gene	Chr11:44359840-44359893 (+)
129S1/SvImJ	ENSMUSG00200040722	miRNA gene	Chr11:41441477-41441530 (+)
A/J	ENSMUSG00195037493	miRNA gene	Chr11:41393920-41393973 (+)
AKR/J	ENSMUSG00220041601	miRNA gene	Chr11:41581314-41581367 (+)
BALB/cJ	ENSMUSG00180037618	miRNA gene	Chr11:41385887-41385940 (+)
C3H/HeJ	ENSMUSG00175040780	miRNA gene	Chr11:41387411-41387464 (+)
C57BL/6NJ	ENSMUSG00215039125	miRNA gene	Chr11:41301253-41301306 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005013157	miRNA gene	Chr11:41122338-41122391 (+)
CBA/J	ENSMUSG00210030794	miRNA gene	Chr11:41276600-41276653 (+)
DBA/2J	ENSMUSG00185028442	miRNA gene	Chr11:41452541-41452594 (+)
FVB/NJ	ENSMUSG00205041362	miRNA gene	Chr11:41379429-41379482 (+)
JF1/MsJ	ENSUMUG00000043355	miRNA gene	Chr11:41684078-41684131 (+)
LP/J	ENSMUSG00230034533	miRNA gene	Chr11:42605739-42605792 (+)
NOD/ShiLtJ	ENSMUSG00190044613	miRNA gene	Chr11:41494784-41494837 (+)
NZO/HlLtJ	ENSMUSG00225036476	miRNA gene	Chr11:44553680-44553733 (+)
PWK/PhJ	ENSLUMG00010007322	miRNA gene	Chr11:41267303-41267356 (+)
SPRET/EiJ	ENSMSPG00010020085	miRNA gene	Chr11:41895585-41895638 (+)
WSB/EiJ	ENSIUOG00005041276	miRNA gene	Chr11:41251154-41251207 (+)

Homology

• Gene Tree
  Gm55501
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075244 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075244	Ensembl Gene Model | MGI Sequence Detail	54	C57BL/6J
transcript	ENSMUST00020183361	Ensembl | MGI Sequence Detail	54	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;