Gm55498 Gene Detail

Summary

• Symbol
  Gm55498
• Name
  predicted gene, 55498

• Feature Type
  snoRNA gene
• IDs
  MGI:6847465
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:88614465-88614599 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  74 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847465	snoRNA gene	Chr3:88614465-88614599 (+)
129S1/SvImJ	ENSMUSG00200040141	snoRNA gene	Chr3:85469366-85469500 (+)
A/J	ENSMUSG00195053742	snoRNA gene	Chr3:85484464-85484598 (+)
AKR/J	ENSMUSG00220051720	snoRNA gene	Chr3:85439102-85439236 (+)
BALB/cJ	ENSMUSG00180050547	snoRNA gene	Chr3:85620884-85621018 (+)
C3H/HeJ	ENSMUSG00175048537	snoRNA gene	Chr3:85417218-85417352 (+)
C57BL/6NJ	ENSMUSG00215050595	snoRNA gene	Chr3:85857119-85857253 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005048146	snoRNA gene	Chr3:84934490-84934624 (+)
CBA/J	ENSMUSG00210048503	snoRNA gene	Chr3:85554910-85555044 (+)
DBA/2J	ENSMUSG00185053935	snoRNA gene	Chr3:85709429-85709563 (+)
FVB/NJ	ENSMUSG00205049724	snoRNA gene	Chr3:84478845-84478979 (+)
JF1/MsJ	ENSUMUG00000051269	snoRNA gene	Chr3:85219198-85219332 (+)
LP/J	ENSMUSG00230036714	snoRNA gene	Chr3:87690730-87690864 (+)
NOD/ShiLtJ	ENSMUSG00190050094	snoRNA gene	Chr3:85938044-85938178 (+)
NZO/HlLtJ	ENSMUSG00225007772	snoRNA gene	Chr3:90446192-90446326 (+)
PWK/PhJ	ENSLUMG00010052477	snoRNA gene	Chr3:85308547-85308681 (+)
SPRET/EiJ	ENSMSPG00010050142	snoRNA gene	Chr3:86158163-86158297 (+)
WSB/EiJ	ENSIUOG00005050670	snoRNA gene	Chr3:85966502-85966636 (+)

Homology

• Gene Tree
  Gm55498
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075203 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075203	Ensembl Gene Model | MGI Sequence Detail	135	C57BL/6J
transcript	ENSMUST00020183753	Ensembl | MGI Sequence Detail	135	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;