Gm55489 Gene Detail

Summary

• Symbol
  Gm55489
• Name
  predicted gene, 55489

• Feature Type
  miRNA gene
• IDs
  MGI:6847447
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:13952784-13952888 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  139 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847447	miRNA gene	Chr5:13952784-13952888 (-)
129S1/SvImJ	ENSMUSG00200012128	miRNA gene	Chr5:10270822-10270926 (-)
A/J	ENSMUSG00195012830	miRNA gene	Chr5:9828343-9828447 (-)
AKR/J	ENSMUSG00220002173	miRNA gene	Chr5:9915596-9915700 (-)
BALB/cJ	ENSMUSG00180017840	miRNA gene	Chr5:9624218-9624322 (-)
C3H/HeJ	ENSMUSG00175028860	miRNA gene	Chr5:9500236-9500340 (-)
C57BL/6NJ	ENSMUSG00215025766	miRNA gene	Chr5:10312285-10312389 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005001954	miRNA gene	Chr5:9867586-9867690 (-)
CBA/J	ENSMUSG00210005606	miRNA gene	Chr5:10373330-10373434 (-)
DBA/2J	ENSMUSG00185017769	miRNA gene	Chr5:10971389-10971493 (-)
FVB/NJ	ENSMUSG00205008567	miRNA gene	Chr5:9557695-9557799 (-)
JF1/MsJ	ENSUMUG00000003201	miRNA gene	Chr5:11338621-11338725 (-)
LP/J	ENSMUSG00230003818	miRNA gene	Chr5:14948963-14949067 (-)
NOD/ShiLtJ	ENSMUSG00190013529	miRNA gene	Chr5:9864976-9865080 (-)
NZO/HlLtJ	ENSMUSG00225009506	miRNA gene	Chr5:18624566-18624670 (-)
PWK/PhJ	ENSLUMG00010037242	miRNA gene	Chr5:10050272-10050376 (-)
SPRET/EiJ	ENSMSPG00010032362	miRNA gene	Chr5:10217514-10217618 (-)
WSB/EiJ	ENSIUOG00005027532	miRNA gene	Chr5:9970262-9970366 (-)

Homology

• Gene Tree
  Gm55489
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075841 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075841	Ensembl Gene Model | MGI Sequence Detail	105	C57BL/6J
transcript	ENSMUST00020183611	Ensembl | MGI Sequence Detail	105	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;