Gm55486 Gene Detail

Summary

• Symbol
  Gm55486
• Name
  predicted gene, 55486

• Feature Type
  rRNA gene
• IDs
  MGI:6847442
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:23639823-23639955 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  89 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847442	rRNA gene	Chr6:23639823-23639955 (-)
129S1/SvImJ	ENSMUSG00200035777	rRNA gene	Chr6:20687015-20687147 (-)
A/J	ENSMUSG00195009363	rRNA gene	Chr6:20632786-20632918 (-)
AKR/J	ENSMUSG00220001084	rRNA gene	Chr6:20200900-20201032 (-)
BALB/cJ	ENSMUSG00180025188	rRNA gene	Chr6:20763849-20763981 (-)
C3H/HeJ	ENSMUSG00175020400	rRNA gene	Chr6:20606908-20607040 (-)
C57BL/6NJ	ENSMUSG00215032134	rRNA gene	Chr6:20702690-20702822 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005022637	rRNA gene	Chr6:20338065-20338197 (-)
CBA/J	ENSMUSG00210004951	rRNA gene	Chr6:20641182-20641314 (-)
DBA/2J	ENSMUSG00185022591	rRNA gene	Chr6:20746184-20746316 (-)
FVB/NJ	ENSMUSG00205035154	rRNA gene	Chr6:20699201-20699333 (-)
JF1/MsJ	ENSUMUG00000042716	rRNA gene	Chr6:20515007-20515139 (-)
LP/J	ENSMUSG00230030969	rRNA gene	Chr6:21708718-21708850 (-)
NOD/ShiLtJ	ENSMUSG00190028133	rRNA gene	Chr6:20493860-20493992 (-)
NZO/HlLtJ	ENSMUSG00225014758	rRNA gene	Chr6:23648536-23648668 (-)
PWK/PhJ	ENSLUMG00010020591	rRNA gene	Chr6:20222785-20222917 (-)
SPRET/EiJ	ENSMSPG00010023903	rRNA gene	Chr6:20594545-20594674 (-)
WSB/EiJ	ENSIUOG00005036271	rRNA gene	Chr6:20752113-20752245 (-)

Homology

• Gene Tree
  Gm55486
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076681 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076681	Ensembl Gene Model | MGI Sequence Detail	133	C57BL/6J
transcript	ENSMUST00020182229	Ensembl | MGI Sequence Detail	133	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;