Gm55479 Gene Detail

Summary

• Symbol
  Gm55479
• Name
  predicted gene, 55479

• Feature Type
  miRNA gene
• IDs
  MGI:6847428
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:3149386-3149506 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  36 from dbSNP Build 142
• Strain Annotations
  20

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847428	miRNA gene	Chr8:3149386-3149506 (-)
129S1/SvImJ	ENSMUSG00200051889	miRNA gene	Chr12:76143222-76143348 (+)
129S1/SvImJ	ENSMUSG00200000372	miRNA gene	Chr1:106204244-106204364 (+)
A/J	ENSMUSG00195011336	miRNA gene	Chr8:372712-372832 (-)
AKR/J	ENSMUSG00220011710	miRNA gene	Chr8:99233-99353 (-)
BALB/cJ	ENSMUSG00180004631	miRNA gene	Chr8:17098-17218 (-)
C3H/HeJ	ENSMUSG00175008180	miRNA gene	Chr8:137870-137990 (-)
C57BL/6NJ	ENSMUSG00215010855	miRNA gene	Chr8:52209-52329 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005021897	miRNA gene	Chr8:114737-114857 (-)
CBA/J	ENSMUSG00210011449	miRNA gene	Chr8:15455-15575 (-)
DBA/2J	ENSMUSG00185003935	miRNA gene	Chr8:151467-151587 (-)
FVB/NJ	ENSMUSG00205005633	miRNA gene	Chr8:85265-85385 (-)
JF1/MsJ	ENSUMUG00000047486	miRNA gene	Chr8:96541-96661 (-)
JF1/MsJ	ENSUMUG00000056056	miRNA gene	Chr14:51745509-51745629 (+)
LP/J	ENSMUSG00230008537	miRNA gene	Chr8:2307824-2307944 (-)
NOD/ShiLtJ	ENSMUSG00190011870	miRNA gene	Chr8:125502-125622 (-)
NZO/HlLtJ	ENSMUSG00225020252	miRNA gene	Chr8:10175279-10175399 (-)
PWK/PhJ	ENSLUMG00010010871	miRNA gene	Chr8:50864-50984 (-)
PWK/PhJ	ENSLUMG00010045047	miRNA gene	Chr14:34215534-34215654 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005005363	miRNA gene	Chr8:55659-55779 (-)

Homology

• Gene Tree
  Gm55479
  

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00002076432 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076432	Ensembl Gene Model | MGI Sequence Detail	121	C57BL/6J
transcript	ENSMUST00020183154	Ensembl | MGI Sequence Detail	121	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;