Gm55477 Gene Detail

Summary

• Symbol
  Gm55477
• Name
  predicted gene, 55477

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6847424
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:180479631-180479748 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  86 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847424	unclassified non-coding RNA gene	Chr2:180479631-180479748 (+)
129S1/SvImJ	ENSMUSG00200002515	unclassified non-coding RNA gene	Chr2:176502367-176502484 (+)
A/J	ENSMUSG00195001162	unclassified non-coding RNA gene	Chr2:176739445-176739562 (+)
AKR/J	ENSMUSG00220000119	unclassified non-coding RNA gene	Chr2:174418079-174418196 (+)
BALB/cJ	ENSMUSG00180000704	unclassified non-coding RNA gene	Chr2:174541965-174542082 (+)
C3H/HeJ	ENSMUSG00175004500	unclassified non-coding RNA gene	Chr2:175700051-175700168 (+)
C57BL/6NJ	ENSMUSG00215002634	unclassified non-coding RNA gene	Chr2:174641382-174641499 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005000863	unclassified non-coding RNA gene	Chr2:173990911-173991028 (+)
CBA/J	ENSMUSG00210001500	unclassified non-coding RNA gene	Chr2:175020175-175020292 (+)
DBA/2J	ENSMUSG00185021308	unclassified non-coding RNA gene	Chr2:176259479-176259596 (+)
FVB/NJ	ENSMUSG00205002506	unclassified non-coding RNA gene	Chr2:175071802-175071919 (+)
JF1/MsJ	ENSUMUG00000035232	unclassified non-coding RNA gene	Chr2:177446958-177447075 (+)
LP/J	ENSMUSG00230026916	unclassified non-coding RNA gene	Chr2:178153318-178153435 (+)
NOD/ShiLtJ	ENSMUSG00190016574	unclassified non-coding RNA gene	Chr2:174561767-174561884 (+)
NZO/HlLtJ	ENSMUSG00225006959	unclassified non-coding RNA gene	Chr2:186240031-186240148 (+)
PWK/PhJ	ENSLUMG00010000382	unclassified non-coding RNA gene	Chr2:174872889-174873006 (+)
SPRET/EiJ	ENSMSPG00010004156	unclassified non-coding RNA gene	Chr2:177347040-177347157 (+)
WSB/EiJ	ENSIUOG00005000230	unclassified non-coding RNA gene	Chr2:174585393-174585510 (+)

Homology

• Gene Tree
  Gm55477
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076540 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076540	Ensembl Gene Model | MGI Sequence Detail	118	C57BL/6J
transcript	ENSMUST00020183208	Ensembl | MGI Sequence Detail	118	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;