Gm55468 Gene Detail

Summary

• Symbol
  Gm55468
• Name
  predicted gene, 55468

• Feature Type
  rRNA gene
• IDs
  MGI:6847406
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:148690133-148690250 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  157 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847406	rRNA gene	Chr5:148690133-148690250 (-)
129S1/SvImJ	ENSMUSG00200010986	rRNA gene	Chr5:142524426-142524543 (-)
A/J	ENSMUSG00195005052	rRNA gene	Chr5:142129249-142129366 (-)
AKR/J	ENSMUSG00220023710	rRNA gene	Chr5:141132391-141132508 (-)
BALB/cJ	ENSMUSG00180003111	rRNA gene	Chr5:142531593-142531710 (-)
C3H/HeJ	ENSMUSG00175012718	rRNA gene	Chr5:144372525-144372642 (-)
C57BL/6NJ	ENSMUSG00215000135	rRNA gene	Chr5:142080151-142080268 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005009957	rRNA gene	Chr5:141649064-141649181 (-)
CBA/J	ENSMUSG00210001246	rRNA gene	Chr5:143271205-143271322 (-)
DBA/2J	ENSMUSG00185041043	rRNA gene	Chr5:146240517-146240634 (-)
FVB/NJ	ENSMUSG00205042069	rRNA gene	Chr5:141910489-141910606 (-)
JF1/MsJ	ENSUMUG00000052652	rRNA gene	Chr5:148733694-148733811 (-)
LP/J	ENSMUSG00230030805	rRNA gene	Chr5:150241163-150241280 (-)
NOD/ShiLtJ	ENSMUSG00190006313	rRNA gene	Chr5:141881446-141881563 (-)
NZO/HlLtJ	ENSMUSG00225008932	rRNA gene	Chr5:157986409-157986526 (-)
PWK/PhJ	ENSLUMG00010021237	rRNA gene	Chr5:140991718-140991835 (-)
SPRET/EiJ	ENSMSPG00010007040	rRNA gene	Chr5:143774379-143774491 (-)
WSB/EiJ	ENSIUOG00005014096	rRNA gene	Chr5:144662978-144663095 (-)

Homology

• Gene Tree
  Gm55468
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076670 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076670	Ensembl Gene Model | MGI Sequence Detail	118	C57BL/6J
transcript	ENSMUST00020181709	Ensembl | MGI Sequence Detail	118	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;