Gm55461 Gene Detail

Summary

• Symbol
  Gm55461
• Name
  predicted gene, 55461

• Feature Type
  miRNA gene
• IDs
  MGI:6847392
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:54808377-54808481 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  107 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847392	miRNA gene	Chr1:54808377-54808481 (+)
129S1/SvImJ	ENSMUSG00200018690	miRNA gene	Chr1:52283378-52283482 (+)
A/J	ENSMUSG00195030762	miRNA gene	Chr1:51840070-51840174 (+)
AKR/J	ENSMUSG00220041546	miRNA gene	Chr1:51926009-51926113 (+)
BALB/cJ	ENSMUSG00180014192	miRNA gene	Chr1:52101601-52101705 (+)
C3H/HeJ	ENSMUSG00175001244	miRNA gene	Chr1:52214926-52215030 (+)
C57BL/6NJ	ENSMUSG00215036541	miRNA gene	Chr1:52136955-52137059 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005013707	miRNA gene	Chr1:52042781-52042885 (+)
CBA/J	ENSMUSG00210054168	miRNA gene	Chr1:51901785-51901889 (+)
DBA/2J	ENSMUSG00185055026	miRNA gene	Chr1:53021390-53021494 (+)
FVB/NJ	ENSMUSG00205022938	miRNA gene	Chr1:51863455-51863559 (+)
JF1/MsJ	ENSUMUG00000046786	miRNA gene	Chr1:51977292-51977397 (+)
LP/J	ENSMUSG00230029505	miRNA gene	Chr1:53030509-53030613 (+)
NOD/ShiLtJ	ENSMUSG00190043751	miRNA gene	Chr1:52048568-52048672 (+)
NZO/HlLtJ	ENSMUSG00225009931	miRNA gene	Chr1:56234902-56235006 (+)
PWK/PhJ	ENSLUMG00010025462	miRNA gene	Chr1:51543618-51543723 (+)
SPRET/EiJ	ENSMSPG00010028134	miRNA gene	Chr1:53323027-53323131 (+)
WSB/EiJ	ENSIUOG00005021923	miRNA gene	Chr1:51708965-51709069 (+)

Homology

• Gene Tree
  Gm55461
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075552 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075552	Ensembl Gene Model | MGI Sequence Detail	105	C57BL/6J
transcript	ENSMUST00020181883	Ensembl | MGI Sequence Detail	105	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;