Gm55457 Gene Detail

Summary

• Symbol
  Gm55457
• Name
  predicted gene, 55457

• Feature Type
  rRNA gene
• IDs
  MGI:6847384
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:14293328-14293440 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  109 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847384	rRNA gene	Chr13:14293328-14293440 (-)
129S1/SvImJ	ENSMUSG00200014854	rRNA gene	Chr13:11513858-11513970 (-)
A/J	ENSMUSG00195042145	rRNA gene	Chr13:10589213-10589325 (-)
AKR/J	ENSMUSG00220035127	rRNA gene	Chr13:10602275-10602387 (-)
BALB/cJ	ENSMUSG00180036860	rRNA gene	Chr13:10938258-10938370 (-)
C3H/HeJ	ENSMUSG00175036707	rRNA gene	Chr13:11039615-11039727 (-)
C57BL/6NJ	ENSMUSG00215037390	rRNA gene	Chr13:11048020-11048132 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005014057	rRNA gene	Chr13:11177407-11177519 (-)
CBA/J	ENSMUSG00210030894	rRNA gene	Chr13:10905196-10905308 (-)
DBA/2J	ENSMUSG00185013954	rRNA gene	Chr13:11599943-11600055 (-)
FVB/NJ	ENSMUSG00205051865	rRNA gene	Chr13:10837642-10837754 (-)
JF1/MsJ	ENSUMUG00000020909	rRNA gene	Chr13:11429711-11429823 (-)
LP/J	ENSMUSG00230036532	rRNA gene	Chr13:21008935-21009047 (-)
NOD/ShiLtJ	ENSMUSG00190024201	rRNA gene	Chr13:10910288-10910400 (-)
NZO/HlLtJ	ENSMUSG00225032505	rRNA gene	Chr13:14775152-14775264 (-)
PWK/PhJ	ENSLUMG00010032211	rRNA gene	Chr13:10382054-10382166 (-)
SPRET/EiJ	ENSMSPG00010026542	rRNA gene	Chr13:10036511-10036623 (-)
WSB/EiJ	ENSIUOG00005036624	rRNA gene	Chr13:10264972-10265084 (-)

Homology

• Gene Tree
  Gm55457
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002074880 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002074880	Ensembl Gene Model | MGI Sequence Detail	113	C57BL/6J
transcript	ENSMUST00020181744	Ensembl | MGI Sequence Detail	113	Not Applicable

References

• Summaries
  All 2

  Phenotypes 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;