Gm55454 Gene Detail

Summary

• Symbol
  Gm55454
• Name
  predicted gene, 55454

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6847378
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:58909041-58909116 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  68 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847378	unclassified non-coding RNA gene	Chr3:58909041-58909116 (+)
129S1/SvImJ	ENSMUSG00200023347	unclassified non-coding RNA gene	Chr3:55792436-55792511 (+)
A/J	ENSMUSG00195032752	unclassified non-coding RNA gene	Chr3:55702858-55702933 (+)
AKR/J	ENSMUSG00220032245	unclassified non-coding RNA gene	Chr3:55762055-55762130 (+)
BALB/cJ	ENSMUSG00180027342	unclassified non-coding RNA gene	Chr3:55787392-55787467 (+)
C3H/HeJ	ENSMUSG00175009072	unclassified non-coding RNA gene	Chr3:55628735-55628810 (+)
C57BL/6NJ	ENSMUSG00215009110	unclassified non-coding RNA gene	Chr3:56072232-56072307 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005002540	unclassified non-coding RNA gene	Chr3:55378322-55378397 (+)
CBA/J	ENSMUSG00210004199	unclassified non-coding RNA gene	Chr3:55744386-55744461 (+)
DBA/2J	ENSMUSG00185028295	unclassified non-coding RNA gene	Chr3:55913284-55913359 (+)
FVB/NJ	ENSMUSG00205004199	unclassified non-coding RNA gene	Chr3:54895290-54895365 (+)
JF1/MsJ	ENSUMUG00000004058	unclassified non-coding RNA gene	Chr3:55330619-55330694 (+)
LP/J	ENSMUSG00230004721	unclassified non-coding RNA gene	Chr3:57924479-57924554 (+)
NOD/ShiLtJ	ENSMUSG00190034939	unclassified non-coding RNA gene	Chr3:56100336-56100411 (+)
NZO/HlLtJ	ENSMUSG00225018892	unclassified non-coding RNA gene	Chr3:60535992-60536067 (+)
PWK/PhJ	ENSLUMG00010005559	unclassified non-coding RNA gene	Chr3:55432313-55432388 (+)
SPRET/EiJ	ENSMSPG00010007719	unclassified non-coding RNA gene	Chr3:56304611-56304686 (+)
WSB/EiJ	ENSIUOG00005009118	unclassified non-coding RNA gene	Chr3:55875818-55875893 (+)

Homology

• Gene Tree
  Gm55454
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075009 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075009	Ensembl Gene Model | MGI Sequence Detail	76	C57BL/6J
transcript	ENSMUST00020183783	Ensembl | MGI Sequence Detail	76	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;