Gm55446 Gene Detail

Summary

• Symbol
  Gm55446
• Name
  predicted gene, 55446

• Feature Type
  miRNA gene
• IDs
  MGI:6847362
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:133168755-133168864 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  102 from dbSNP Build 142
• Strain Annotations
  43

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847362	miRNA gene	Chr6:133168755-133168864 (+)
129S1/SvImJ	ENSMUSG00200045882	miRNA gene	Chr9:106556828-106556933 (-)
129S1/SvImJ	ENSMUSG00200048826	miRNA gene	Chr6:126964437-126964545 (+)
129S1/SvImJ	ENSMUSG00200046728	miRNA gene	Chr6:130668011-130668120 (+)
A/J	ENSMUSG00195000333	miRNA gene	Chr4:26967992-26968098 (+)
A/J	ENSMUSG00195033420	miRNA gene	Chr6:129228905-129229014 (+)
A/J	ENSMUSG00195046844	miRNA gene	Chr9:105842156-105842261 (-)
AKR/J	ENSMUSG00220042425	miRNA gene	Chr6:127766139-127766248 (+)
AKR/J	ENSMUSG00220014837	miRNA gene	Chr4:26720502-26720608 (+)
BALB/cJ	ENSMUSG00180000375	miRNA gene	Chr4:26466602-26466708 (+)
BALB/cJ	ENSMUSG00180038059	miRNA gene	Chr9:106297090-106297195 (-)
BALB/cJ	ENSMUSG00180048561	miRNA gene	Chr4:107367920-107368029 (-)
BALB/cJ	ENSMUSG00180040925	miRNA gene	Chr6:129296485-129296594 (+)
C3H/HeJ	ENSMUSG00175044037	miRNA gene	Chr6:129245890-129245999 (+)
C3H/HeJ	ENSMUSG00175002449	miRNA gene	Chr4:26906180-26906286 (+)
C57BL/6NJ	ENSMUSG00215032212	miRNA gene	Chr6:129786266-129786375 (+)
C57BL/6NJ	ENSMUSG00215038071	miRNA gene	Chr6:126704579-126704687 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005032343	miRNA gene	Chr15:89185466-89185575 (+)
CAST/EiJ	ENSTCUG00005043345	miRNA gene	Chr6:130086549-130086658 (+)
CBA/J	ENSMUSG00210016921	miRNA gene	Chr6:129265280-129265389 (+)
CBA/J	ENSMUSG00210047256	miRNA gene	Chr9:106235785-106235890 (-)
CBA/J	ENSMUSG00210005043	miRNA gene	Chr4:26630971-26631077 (+)
DBA/2J	ENSMUSG00185046030	miRNA gene	Chr6:129963917-129964026 (+)
FVB/NJ	ENSMUSG00205039540	miRNA gene	Chr6:128849218-128849327 (+)
FVB/NJ	ENSMUSG00205050942	miRNA gene	Chr9:106500070-106500175 (-)
FVB/NJ	ENSMUSG00205044151	miRNA gene	Chr6:125973857-125973965 (+)
JF1/MsJ	ENSUMUG00000046649	miRNA gene	Chr15:89197345-89197454 (+)
JF1/MsJ	ENSUMUG00000002939	miRNA gene	Chr4:26709183-26709289 (+)
JF1/MsJ	ENSUMUG00000042216	miRNA gene	Chr6:128652332-128652441 (+)
LP/J	ENSMUSG00230046038	miRNA gene	Chr6:131162656-131162765 (+)
LP/J	ENSMUSG00230050664	miRNA gene	Chr9:106689043-106689148 (-)
LP/J	ENSMUSG00230022950	miRNA gene	Chr12:71633008-71633116 (-)
LP/J	ENSMUSG00230012618	miRNA gene	Chr18:59580830-59580939 (+)
NOD/ShiLtJ	ENSMUSG00190045162	miRNA gene	Chr6:126122623-126122731 (+)
NOD/ShiLtJ	ENSMUSG00190042790	miRNA gene	Chr6:130117817-130117926 (+)
NOD/ShiLtJ	ENSMUSG00190000674	miRNA gene	Chr4:26659106-26659212 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010007932	miRNA gene	Chr4:26182182-26182288 (+)
PWK/PhJ	ENSLUMG00010044654	miRNA gene	Chr6:127773297-127773406 (+)
SPRET/EiJ	ENSMSPG00010014203	miRNA gene	Chr1:44014014-44014122 (-)
SPRET/EiJ	ENSMSPG00010037427	miRNA gene	Chr6:131501557-131501666 (+)
SPRET/EiJ	ENSMSPG00010037451	miRNA gene	Chr6:131892791-131892900 (+)
SPRET/EiJ	ENSMSPG00010022319	miRNA gene	Chr13:13249697-13249806 (-)
SPRET/EiJ	ENSMSPG00010008733	miRNA gene	Chr4:97476502-97476610 (-)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm55446
  

Sequences &
Gene Models

• All Sequences
  45

• Ensembl
  ENSMUSG00002074979 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002074979	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020183256	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;