Gm55439 Gene Detail

Summary

• Symbol
  Gm55439
• Name
  predicted gene, 55439

• Feature Type
  miRNA gene
• IDs
  MGI:6847348
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:56149913-56150016 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  144 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847348	miRNA gene	Chr6:56149913-56150016 (-)
129S1/SvImJ	ENSMUSG00200006450	miRNA gene	Chr6:53126292-53126395 (-)
A/J	ENSMUSG00195034838	miRNA gene	Chr6:52856858-52856961 (-)
AKR/J	ENSMUSG00220006493	miRNA gene	Chr6:52553349-52553452 (-)
BALB/cJ	ENSMUSG00180010243	miRNA gene	Chr6:53150763-53150866 (-)
C3H/HeJ	ENSMUSG00175040226	miRNA gene	Chr6:52914912-52915015 (-)
C57BL/6NJ	ENSMUSG00215030930	miRNA gene	Chr6:53135592-53135695 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005040896	miRNA gene	Chr6:52395351-52395454 (-)
CBA/J	ENSMUSG00210034612	miRNA gene	Chr6:52956136-52956239 (-)
DBA/2J	ENSMUSG00185020090	miRNA gene	Chr6:53535794-53535897 (-)
FVB/NJ	ENSMUSG00205033355	miRNA gene	Chr6:53185795-53185898 (-)
JF1/MsJ	ENSUMUG00000037960	miRNA gene	Chr6:52920767-52920870 (-)
LP/J	ENSMUSG00230014695	miRNA gene	Chr6:54623244-54623347 (-)
NOD/ShiLtJ	ENSMUSG00190009160	miRNA gene	Chr6:52867319-52867422 (-)
NZO/HlLtJ	ENSMUSG00225014065	miRNA gene	Chr6:56614980-56615083 (-)
PWK/PhJ	ENSLUMG00010018786	miRNA gene	Chr6:52668428-52668531 (-)
SPRET/EiJ	ENSMSPG00010009838	miRNA gene	Chr6:53298340-53298443 (-)
WSB/EiJ	ENSIUOG00005021739	miRNA gene	Chr6:53216487-53216590 (-)

Homology

• Gene Tree
  Gm55439
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076183 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076183	Ensembl Gene Model | MGI Sequence Detail	104	C57BL/6J
transcript	ENSMUST00020183558	Ensembl | MGI Sequence Detail	104	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;