Gm55438 Gene Detail

Summary

• Symbol
  Gm55438
• Name
  predicted gene, 55438

• Feature Type
  rRNA gene
• IDs
  MGI:6847346
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:132541935-132542055 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  158 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847346	rRNA gene	Chr6:132541935-132542055 (+)
129S1/SvImJ	ENSMUSG00200046916	rRNA gene	Chr6:130037007-130037127 (+)
A/J	ENSMUSG00195033230	rRNA gene	Chr6:128674512-128674632 (+)
AKR/J	ENSMUSG00220042055	rRNA gene	Chr6:127211341-127211461 (+)
BALB/cJ	ENSMUSG00180041867	rRNA gene	Chr6:128742194-128742314 (+)
C3H/HeJ	ENSMUSG00175041511	rRNA gene	Chr6:128691539-128691659 (+)
C57BL/6NJ	ENSMUSG00215034913	rRNA gene	Chr6:129187770-129187890 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005042699	rRNA gene	Chr6:129498826-129498946 (+)
CBA/J	ENSMUSG00210017044	rRNA gene	Chr6:128710971-128711091 (+)
DBA/2J	ENSMUSG00185044118	rRNA gene	Chr6:129409560-129409680 (+)
FVB/NJ	ENSMUSG00205039218	rRNA gene	Chr6:128219953-128220073 (+)
JF1/MsJ	ENSUMUG00000047144	rRNA gene	Chr6:128078511-128078631 (+)
LP/J	ENSMUSG00230046062	rRNA gene	Chr6:130608355-130608475 (+)
NOD/ShiLtJ	ENSMUSG00190042972	rRNA gene	Chr6:129496860-129496980 (+)
NZO/HlLtJ	ENSMUSG00225007691	rRNA gene	Chr6:133385255-133385375 (+)
PWK/PhJ	ENSLUMG00010045466	rRNA gene	Chr6:127201306-127201426 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005046661	rRNA gene	Chr6:129762857-129762977 (+)

Homology

• Gene Tree
  Gm55438
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002075937 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075937	Ensembl Gene Model | MGI Sequence Detail	121	C57BL/6J
transcript	ENSMUST00020182563	Ensembl | MGI Sequence Detail	121	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;