Gm55434 Gene Detail

Summary

• Symbol
  Gm55434
• Name
  predicted gene, 55434

• Feature Type
  miRNA gene
• IDs
  MGI:6847338
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:88944963-88945072 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  49 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847338	miRNA gene	Chr7:88944963-88945072 (-)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195053623	miRNA gene	Chr7:6318618-6318727 (+)
A/J	ENSMUSG00195042321	miRNA gene	Chr7:80273076-80273185 (-)
AKR/J	ENSMUSG00220042528	miRNA gene	Chr7:73743398-73743507 (-)
BALB/cJ	ENSMUSG00180041232	miRNA gene	Chr7:76950039-76950148 (-)
BALB/cJ	ENSMUSG00180010413	miRNA gene	Chr14:78376192-78376297 (-)
C3H/HeJ	no annotation
C57BL/6NJ	ENSMUSG00215033512	miRNA gene	Chr7:76780526-76780635 (-)
C57BL/6NJ	ENSMUSG00215046369	miRNA gene	Chr7:6915062-6915171 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005046944	miRNA gene	Chr7:80270687-80270784 (-)
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	ENSMUSG00205039517	miRNA gene	Chr7:77428153-77428262 (-)
FVB/NJ	ENSMUSG00205010664	miRNA gene	Chr14:78032490-78032595 (-)
JF1/MsJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190028915	miRNA gene	Chr7:77694140-77694249 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010012943	miRNA gene	Chr7:76987030-76987116 (-)
WSB/EiJ	ENSIUOG00005033760	miRNA gene	Chr7:78033124-78033233 (-)

Homology

• Gene Tree
  Gm55434
  

Sequences &
Gene Models

• All Sequences
  16

• Ensembl
  ENSMUSG00002075979 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075979	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020182951	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;