Gm55420 Gene Detail

Summary

• Symbol
  Gm55420
• Name
  predicted gene, 55420

• Feature Type
  rRNA gene
• IDs
  MGI:6847310
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:91443874-91443986 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  130 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847310	rRNA gene	Chr15:91443874-91443986 (-)
129S1/SvImJ	ENSMUSG00200036001	rRNA gene	Chr15:88598643-88598755 (-)
A/J	ENSMUSG00195020648	rRNA gene	Chr15:88493390-88493502 (-)
AKR/J	ENSMUSG00220031514	rRNA gene	Chr15:88540718-88540830 (-)
BALB/cJ	ENSMUSG00180015527	rRNA gene	Chr15:88371698-88371810 (-)
C3H/HeJ	ENSMUSG00175028600	rRNA gene	Chr15:88679848-88679960 (-)
C57BL/6NJ	ENSMUSG00215033791	rRNA gene	Chr15:88482350-88482462 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005032067	rRNA gene	Chr15:87991647-87991759 (-)
CBA/J	ENSMUSG00210013184	rRNA gene	Chr15:88449290-88449402 (-)
DBA/2J	ENSMUSG00185023151	rRNA gene	Chr15:88464297-88464409 (-)
FVB/NJ	ENSMUSG00205038496	rRNA gene	Chr15:88221638-88221750 (-)
JF1/MsJ	ENSUMUG00000046148	rRNA gene	Chr15:88021471-88021583 (-)
LP/J	ENSMUSG00230046873	rRNA gene	Chr15:91820979-91821091 (-)
NOD/ShiLtJ	ENSMUSG00190029756	rRNA gene	Chr15:88494406-88494518 (-)
NZO/HlLtJ	ENSMUSG00225044220	rRNA gene	Chr15:92135273-92135385 (-)
PWK/PhJ	ENSLUMG00010034892	rRNA gene	Chr15:88162347-88162459 (-)
SPRET/EiJ	ENSMSPG00010014495	rRNA gene	Chr15:89962133-89962245 (-)
WSB/EiJ	ENSIUOG00005011576	rRNA gene	Chr15:88551599-88551711 (-)

Homology

• Gene Tree
  Gm55420
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075483 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075483	Ensembl Gene Model | MGI Sequence Detail	113	C57BL/6J
transcript	ENSMUST00020183183	Ensembl | MGI Sequence Detail	113	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;