Gm55416 Gene Detail

Summary

• Symbol
  Gm55416
• Name
  predicted gene, 55416

• Feature Type
  miRNA gene
• IDs
  MGI:6847302
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:13084012-13084127 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  95 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847302	miRNA gene	Chr17:13084012-13084127 (-)
129S1/SvImJ	ENSMUSG00200034746	miRNA gene	Chr17:9315626-9315739 (-)
A/J	ENSMUSG00195023944	miRNA gene	Chr17:9514953-9515066 (-)
AKR/J	ENSMUSG00220030166	miRNA gene	Chr17:9583731-9583844 (-)
BALB/cJ	ENSMUSG00180027077	miRNA gene	Chr17:9164166-9164279 (-)
C3H/HeJ	ENSMUSG00175035108	miRNA gene	Chr17:9303586-9303697 (-)
C57BL/6NJ	ENSMUSG00215031913	miRNA gene	Chr17:9353370-9353485 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005022498	miRNA gene	Chr17:9553265-9553426 (-)
CBA/J	ENSMUSG00210038999	miRNA gene	Chr17:8966858-8966971 (-)
DBA/2J	ENSMUSG00185024366	miRNA gene	Chr17:10064501-10064614 (-)
FVB/NJ	ENSMUSG00205009838	miRNA gene	Chr17:9392385-9392500 (-)
JF1/MsJ	ENSUMUG00000038757	miRNA gene	Chr17:9662301-9662438 (-)
LP/J	ENSMUSG00230027652	miRNA gene	Chr17:11499276-11499389 (-)
NOD/ShiLtJ	ENSMUSG00190037501	miRNA gene	Chr17:9498506-9498615 (-)
NZO/HlLtJ	ENSMUSG00225049227	miRNA gene	Chr17:13418166-13418279 (-)
PWK/PhJ	ENSLUMG00010019710	miRNA gene	Chr17:9484284-9484387 (-)
SPRET/EiJ	ENSMSPG00010038681	miRNA gene	Chr17:4121218-4121378 (-)
WSB/EiJ	ENSIUOG00005014478	miRNA gene	Chr17:9390494-9390609 (-)

Homology

• Gene Tree
  Gm55416
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075627 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075627	Ensembl Gene Model | MGI Sequence Detail	116	C57BL/6J
transcript	ENSMUST00020181714	Ensembl | MGI Sequence Detail	116	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;