Gm55410 Gene Detail

Summary

• Symbol
  Gm55410
• Name
  predicted gene, 55410

• Feature Type
  miRNA gene
• IDs
  MGI:6847291
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr4:76876659-76876735 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  119 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847291	miRNA gene	Chr4:76876659-76876735 (-)
129S1/SvImJ	ENSMUSG00200000836	miRNA gene	Chr4:71819307-71819383 (-)
A/J	ENSMUSG00195006172	miRNA gene	Chr4:72360527-72360603 (-)
AKR/J	ENSMUSG00220007986	miRNA gene	Chr4:71784371-71784447 (-)
BALB/cJ	ENSMUSG00180008331	miRNA gene	Chr4:71319548-71319624 (-)
C3H/HeJ	ENSMUSG00175004114	miRNA gene	Chr4:72281614-72281690 (-)
C57BL/6NJ	ENSMUSG00215002337	miRNA gene	Chr4:72232909-72232985 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005000893	miRNA gene	Chr4:71860986-71861062 (-)
CBA/J	ENSMUSG00210001254	miRNA gene	Chr4:71865469-71865545 (-)
DBA/2J	ENSMUSG00185000777	miRNA gene	Chr4:72412954-72413030 (-)
FVB/NJ	ENSMUSG00205001108	miRNA gene	Chr4:70619514-70619590 (-)
JF1/MsJ	ENSUMUG00000031331	miRNA gene	Chr4:72935894-72935970 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190000994	miRNA gene	Chr4:71293098-71293174 (-)
NZO/HlLtJ	ENSMUSG00225028107	miRNA gene	Chr4:80918835-80918911 (-)
PWK/PhJ	ENSLUMG00010001644	miRNA gene	Chr4:70675910-70675986 (-)
SPRET/EiJ	ENSMSPG00010007836	miRNA gene	Chr4:72124270-72124346 (-)
WSB/EiJ	ENSIUOG00005009758	miRNA gene	Chr4:71654529-71654605 (-)

Homology

• Gene Tree
  Gm55410
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002076969 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076969	Ensembl Gene Model | MGI Sequence Detail	77	C57BL/6J
transcript	ENSMUST00020183123	Ensembl | MGI Sequence Detail	77	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm55410:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr42176	Chr4:76877349-76877372 (-)	-626 bp