Gm55409 Gene Detail

Summary

• Symbol
  Gm55409
• Name
  predicted gene, 55409

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6847289
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:116730620-116730792 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  83 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847289	unclassified non-coding RNA gene	Chr11:116730620-116730792 (-)
129S1/SvImJ	ENSMUSG00200052413	unclassified non-coding RNA gene	Chr11:114096339-114096511 (-)
A/J	ENSMUSG00195031461	unclassified non-coding RNA gene	Chr11:113764582-113764754 (-)
AKR/J	ENSMUSG00220033861	unclassified non-coding RNA gene	Chr11:113921418-113921590 (-)
BALB/cJ	ENSMUSG00180052171	unclassified non-coding RNA gene	Chr11:114057971-114058143 (-)
C3H/HeJ	ENSMUSG00175046671	unclassified non-coding RNA gene	Chr11:114016314-114016486 (-)
C57BL/6NJ	ENSMUSG00215047034	unclassified non-coding RNA gene	Chr11:113590868-113591040 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005035165	unclassified non-coding RNA gene	Chr11:113440132-113440304 (-)
CBA/J	ENSMUSG00210050739	unclassified non-coding RNA gene	Chr11:113736640-113736812 (-)
DBA/2J	ENSMUSG00185026917	unclassified non-coding RNA gene	Chr11:114049726-114049898 (-)
FVB/NJ	ENSMUSG00205045660	unclassified non-coding RNA gene	Chr11:113894332-113894504 (-)
JF1/MsJ	ENSUMUG00000053590	unclassified non-coding RNA gene	Chr11:114336584-114336756 (-)
LP/J	ENSMUSG00230051355	unclassified non-coding RNA gene	Chr11:115109525-115109697 (-)
NOD/ShiLtJ	ENSMUSG00190049029	unclassified non-coding RNA gene	Chr11:114118278-114118450 (-)
NZO/HlLtJ	ENSMUSG00225053539	unclassified non-coding RNA gene	Chr11:117263693-117263865 (-)
PWK/PhJ	ENSLUMG00010024676	unclassified non-coding RNA gene	Chr11:113841343-113841515 (-)
SPRET/EiJ	ENSMSPG00010045378	unclassified non-coding RNA gene	Chr11:114404896-114405068 (-)
WSB/EiJ	ENSIUOG00005048201	unclassified non-coding RNA gene	Chr11:113848376-113848548 (-)

Homology

• Gene Tree
  Gm55409
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076427 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076427	Ensembl Gene Model | MGI Sequence Detail	173	C57BL/6J
transcript	ENSMUST00020182605	Ensembl | MGI Sequence Detail	173	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;