Gm55408 Gene Detail

Summary

• Symbol
  Gm55408
• Name
  predicted gene, 55408

• Feature Type
  snRNA gene
• IDs
  MGI:6847287
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:152996933-152997035 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  106 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847287	snRNA gene	Chr2:152996933-152997035 (+)
129S1/SvImJ	ENSMUSG00200031879	snRNA gene	Chr2:149911737-149911839 (+)
A/J	ENSMUSG00195022819	snRNA gene	Chr2:150185999-150186101 (+)
AKR/J	ENSMUSG00220046544	snRNA gene	Chr2:149507347-149507449 (+)
BALB/cJ	ENSMUSG00180044729	snRNA gene	Chr2:149677841-149677943 (+)
C3H/HeJ	ENSMUSG00175046371	snRNA gene	Chr2:150422080-150422182 (+)
C57BL/6NJ	ENSMUSG00215035791	snRNA gene	Chr2:149841956-149842058 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005043959	snRNA gene	Chr2:148763620-148763722 (+)
CBA/J	ENSMUSG00210046759	snRNA gene	Chr2:150358591-150358693 (+)
DBA/2J	ENSMUSG00185048890	snRNA gene	Chr2:150016066-150016168 (+)
FVB/NJ	ENSMUSG00205041119	snRNA gene	Chr2:149102378-149102480 (+)
JF1/MsJ	ENSUMUG00000049146	snRNA gene	Chr2:149674759-149674861 (+)
LP/J	ENSMUSG00230037194	snRNA gene	Chr2:151660403-151660505 (+)
NOD/ShiLtJ	ENSMUSG00190044296	snRNA gene	Chr2:149773856-149773958 (+)
NZO/HlLtJ	ENSMUSG00225005923	snRNA gene	Chr2:159692675-159692777 (+)
PWK/PhJ	ENSLUMG00010046767	snRNA gene	Chr2:149648477-149648579 (+)
SPRET/EiJ	ENSMSPG00010030158	snRNA gene	Chr2:152360666-152360768 (+)
WSB/EiJ	ENSIUOG00005048004	snRNA gene	Chr2:149506942-149507044 (+)

Homology

• Gene Tree
  Gm55408
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075309 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075309	Ensembl Gene Model | MGI Sequence Detail	103	C57BL/6J
transcript	ENSMUST00020181721	Ensembl | MGI Sequence Detail	103	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;