Gm55406 Gene Detail

Summary

• Symbol
  Gm55406
• Name
  predicted gene, 55406

• Feature Type
  miRNA gene
• IDs
  MGI:6847283
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:18009448-18009558 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  97 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847283	miRNA gene	Chr9:18009448-18009558 (-)
129S1/SvImJ	ENSMUSG00200049500	miRNA gene	Chr9:14875826-14875936 (-)
A/J	ENSMUSG00195039682	miRNA gene	Chr9:14799403-14799513 (-)
AKR/J	ENSMUSG00220036482	miRNA gene	Chr9:14775501-14775611 (-)
BALB/cJ	ENSMUSG00180044223	miRNA gene	Chr9:14927464-14927574 (-)
C3H/HeJ	ENSMUSG00175042898	miRNA gene	Chr9:14881053-14881163 (-)
C57BL/6NJ	ENSMUSG00215039540	miRNA gene	Chr9:14865067-14865177 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005035602	miRNA gene	Chr9:14843123-14843233 (-)
CBA/J	ENSMUSG00210045366	miRNA gene	Chr9:14877600-14877710 (-)
DBA/2J	ENSMUSG00185027252	miRNA gene	Chr9:14992883-14992993 (-)
FVB/NJ	ENSMUSG00205041943	miRNA gene	Chr9:15111274-15111384 (-)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230044093	miRNA gene	Chr9:15366286-15366396 (-)
NOD/ShiLtJ	ENSMUSG00190042233	miRNA gene	Chr9:14903693-14903803 (-)
NZO/HlLtJ	ENSMUSG00225051048	miRNA gene	Chr9:15262256-15262366 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005045159	miRNA gene	Chr9:14544031-14544141 (-)

Homology

• Gene Tree
  Gm55406
  

Sequences &
Gene Models

• All Sequences
  17

• Ensembl
  ENSMUSG00002076142 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076142	Ensembl Gene Model | MGI Sequence Detail	111	C57BL/6J
transcript	ENSMUST00020182640	Ensembl | MGI Sequence Detail	111	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;