Gm55402 Gene Detail

Summary

• Symbol
  Gm55402
• Name
  predicted gene, 55402

• Feature Type
  snRNA gene
• IDs
  MGI:6847275
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:129988800-129988861 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  83 from dbSNP Build 142
• Strain Annotations
  10

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847275	snRNA gene	Chr6:129988800-129988861 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	ENSMUSG00220042980	snRNA gene	Chr6:125284146-125284179 (+)
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	ENSMUSG00215035369	snRNA gene	Chr6:126819119-126819180 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005041994	snRNA gene	Chr6:126799676-126799741 (+)
CBA/J	ENSMUSG00210016713	snRNA gene	Chr6:126466054-126466073 (+)
DBA/2J	no annotation
FVB/NJ	ENSMUSG00205043741	snRNA gene	Chr6:126035143-126035176 (+)
JF1/MsJ	ENSUMUG00000046962	snRNA gene	Chr6:125885921-125885985 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190041259	snRNA gene	Chr6:126233237-126233302 (+)
NZO/HlLtJ	ENSMUSG00225018531	snRNA gene	Chr6:130709414-130709479 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005046800	snRNA gene	Chr6:126946660-126946725 (+)

Homology

• Gene Tree
  Gm55402
  

Sequences &
Gene Models

• All Sequences
  12

• Ensembl
  ENSMUSG00002075615 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075615	Ensembl Gene Model | MGI Sequence Detail	62	C57BL/6J
transcript	ENSMUST00020183042	Ensembl | MGI Sequence Detail	62	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;