Gm55401 Gene Detail

Summary

• Symbol
  Gm55401
• Name
  predicted gene, 55401

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6847273
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:14094542-14094822 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  109 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847273	unclassified non-coding RNA gene	Chr3:14094542-14094822 (-)
129S1/SvImJ	ENSMUSG00200018287	unclassified non-coding RNA gene	Chr3:10829498-10829778 (-)
A/J	ENSMUSG00195016452	unclassified non-coding RNA gene	Chr3:11116458-11116738 (-)
AKR/J	ENSMUSG00220009623	unclassified non-coding RNA gene	Chr3:11164876-11165156 (-)
BALB/cJ	ENSMUSG00180001057	unclassified non-coding RNA gene	Chr3:11137386-11137666 (-)
C3H/HeJ	ENSMUSG00175003204	unclassified non-coding RNA gene	Chr3:11127562-11127842 (-)
C57BL/6NJ	ENSMUSG00215001311	unclassified non-coding RNA gene	Chr3:11135861-11136141 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005025010	unclassified non-coding RNA gene	Chr3:11077423-11077703 (-)
CBA/J	ENSMUSG00210001788	unclassified non-coding RNA gene	Chr3:11108608-11108888 (-)
DBA/2J	ENSMUSG00185000680	unclassified non-coding RNA gene	Chr3:11112082-11112362 (-)
FVB/NJ	ENSMUSG00205002645	unclassified non-coding RNA gene	Chr3:10853516-10853796 (-)
JF1/MsJ	ENSUMUG00000019662	unclassified non-coding RNA gene	Chr3:10933476-10933756 (-)
LP/J	ENSMUSG00230004863	unclassified non-coding RNA gene	Chr3:13031415-13031695 (-)
NOD/ShiLtJ	ENSMUSG00190002379	unclassified non-coding RNA gene	Chr3:11218785-11219065 (-)
NZO/HlLtJ	ENSMUSG00225001021	unclassified non-coding RNA gene	Chr3:15613545-15613825 (-)
PWK/PhJ	ENSLUMG00010003361	unclassified non-coding RNA gene	Chr3:11093270-11093550 (-)
SPRET/EiJ	ENSMSPG00010001916	unclassified non-coding RNA gene	Chr3:10958650-10958930 (-)
WSB/EiJ	ENSIUOG00005001647	unclassified non-coding RNA gene	Chr3:11181455-11181735 (-)

Homology

• Gene Tree
  Gm55401
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076698 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076698	Ensembl Gene Model | MGI Sequence Detail	281	C57BL/6J
transcript	ENSMUST00020182357	Ensembl | MGI Sequence Detail	281	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;