Gm55399 Gene Detail

Summary

• Symbol
  Gm55399
• Name
  predicted gene, 55399

• Feature Type
  miRNA gene
• IDs
  MGI:6847269
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:32888480-32888552 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  130 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847269	miRNA gene	Chr16:32888480-32888552 (+)
129S1/SvImJ	ENSMUSG00200036622	miRNA gene	Chr16:29909764-29909836 (+)
A/J	ENSMUSG00195030742	miRNA gene	Chr16:29448210-29448282 (+)
AKR/J	ENSMUSG00220032751	miRNA gene	Chr16:29734164-29734236 (+)
BALB/cJ	ENSMUSG00180030742	miRNA gene	Chr16:29664071-29664143 (+)
C3H/HeJ	ENSMUSG00175038448	miRNA gene	Chr16:29805979-29806051 (+)
C57BL/6NJ	ENSMUSG00215023672	miRNA gene	Chr16:29694659-29694731 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005036222	miRNA gene	Chr16:30077723-30077781 (+)
CBA/J	ENSMUSG00210038649	miRNA gene	Chr16:29847969-29848041 (+)
DBA/2J	ENSMUSG00185020023	miRNA gene	Chr16:29763451-29763523 (+)
FVB/NJ	ENSMUSG00205024901	miRNA gene	Chr16:29779629-29779701 (+)
JF1/MsJ	ENSUMUG00000042122	miRNA gene	Chr16:29979856-29979914 (+)
LP/J	ENSMUSG00230033169	miRNA gene	Chr16:32332154-32332226 (+)
NOD/ShiLtJ	ENSMUSG00190037045	miRNA gene	Chr16:29956288-29956360 (+)
NZO/HlLtJ	ENSMUSG00225040591	miRNA gene	Chr16:35568687-35568775 (+)
PWK/PhJ	ENSLUMG00010036341	miRNA gene	Chr16:29827682-29827740 (+)
SPRET/EiJ	ENSMSPG00010019231	miRNA gene	Chr16:29791973-29792037 (+)
WSB/EiJ	ENSIUOG00005034430	miRNA gene	Chr16:29944431-29944503 (+)

Homology

• Gene Tree
  Gm55399
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076382 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076382	Ensembl Gene Model | MGI Sequence Detail	73	C57BL/6J
transcript	ENSMUST00020183666	Ensembl | MGI Sequence Detail	73	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;