Gm55398 Gene Detail

Summary

• Symbol
  Gm55398
• Name
  predicted gene, 55398

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6847267
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:13577421-13577717 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  71 from dbSNP Build 142
• Strain Annotations
  11

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847267	unclassified non-coding RNA gene	Chr13:13577421-13577717 (+)
129S1/SvImJ	ENSMUSG00200014145	unclassified non-coding RNA gene	Chr13:10811030-10811326 (+)
A/J	ENSMUSG00195013083	unclassified non-coding RNA gene	Chr13:9859589-9859885 (+)
AKR/J	no annotation
BALB/cJ	ENSMUSG00180036697	unclassified non-coding RNA gene	Chr13:10208676-10208972 (+)
C3H/HeJ	ENSMUSG00175035218	unclassified non-coding RNA gene	Chr13:10317657-10317953 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005026220	unclassified non-coding RNA gene	Chr13:9892673-9892969 (+)
CBA/J	no annotation
DBA/2J	ENSMUSG00185015058	unclassified non-coding RNA gene	Chr13:10877944-10878240 (+)
FVB/NJ	no annotation
JF1/MsJ	no annotation
LP/J	ENSMUSG00230036683	unclassified non-coding RNA gene	Chr13:20286997-20287293 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225032564	unclassified non-coding RNA gene	Chr13:14053270-14053566 (+)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010024641	unclassified non-coding RNA gene	Chr13:9347055-9347342 (+)
WSB/EiJ	ENSIUOG00005022660	unclassified non-coding RNA gene	Chr13:9166920-9167216 (+)

Homology

• Gene Tree
  Gm55398
  

Sequences &
Gene Models

• All Sequences
  13

• Ensembl
  ENSMUSG00002074976 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002074976	Ensembl Gene Model | MGI Sequence Detail	297	C57BL/6J
transcript	ENSMUST00020183365	Ensembl | MGI Sequence Detail	297	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;