Gm55394 Gene Detail

Summary

• Symbol
  Gm55394
• Name
  predicted gene, 55394

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6847259
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:12680940-12681203 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  88 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847259	unclassified non-coding RNA gene	Chr13:12680940-12681203 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	ENSMUSG00220013754	unclassified non-coding RNA gene	Chr13:9518740-9519003 (+)
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	ENSMUSG00215022313	unclassified non-coding RNA gene	Chr13:9987298-9987561 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210023174	unclassified non-coding RNA gene	Chr13:9245127-9245390 (+)
DBA/2J	ENSMUSG00185024999	unclassified non-coding RNA gene	Chr13:9934243-9934506 (+)
FVB/NJ	ENSMUSG00205030031	unclassified non-coding RNA gene	Chr13:9723661-9723924 (+)
JF1/MsJ	ENSUMUG00000008907	unclassified non-coding RNA gene	Chr13:9967130-9967393 (+)
JF1/MsJ	ENSUMUG00000020233	unclassified non-coding RNA gene	Chr13:10707069-10707332 (+)
LP/J	ENSMUSG00230007974	unclassified non-coding RNA gene	Chr13:19421580-19421843 (+)
NOD/ShiLtJ	ENSMUSG00190013297	unclassified non-coding RNA gene	Chr13:9383037-9383300 (+)
NZO/HlLtJ	ENSMUSG00225032802	unclassified non-coding RNA gene	Chr13:13316470-13316733 (+)
PWK/PhJ	ENSLUMG00010017852	unclassified non-coding RNA gene	Chr13:9323284-9323546 (+)
PWK/PhJ	ENSLUMG00010017546	unclassified non-coding RNA gene	Chr13:9660005-9660268 (+)
SPRET/EiJ	ENSMSPG00010024428	unclassified non-coding RNA gene	Chr13:9347055-9347308 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm55394
  

Sequences &
Gene Models

• All Sequences
  16

• Ensembl
  ENSMUSG00002076119 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076119	Ensembl Gene Model | MGI Sequence Detail	264	C57BL/6J
transcript	ENSMUST00020182182	Ensembl | MGI Sequence Detail	264	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;