Gm55392 Gene Detail

Summary

• Symbol
  Gm55392
• Name
  predicted gene, 55392

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6847255
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr4:111845847-111846155 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  78 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847255	unclassified non-coding RNA gene	Chr4:111845847-111846155 (-)
129S1/SvImJ	ENSMUSG00200049739	unclassified non-coding RNA gene	Chr4:106898518-106898843 (-)
A/J	ENSMUSG00195047370	unclassified non-coding RNA gene	Chr4:107434962-107435287 (-)
AKR/J	ENSMUSG00220012756	unclassified non-coding RNA gene	Chr4:106765068-106765257 (-)
BALB/cJ	ENSMUSG00180047397	unclassified non-coding RNA gene	Chr4:106256792-106257117 (-)
C3H/HeJ	ENSMUSG00175043799	unclassified non-coding RNA gene	Chr4:107271336-107271661 (-)
C57BL/6NJ	ENSMUSG00215036281	unclassified non-coding RNA gene	Chr4:107214447-107214755 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005022848	unclassified non-coding RNA gene	Chr4:106259052-106259394 (-)
CBA/J	ENSMUSG00210053320	unclassified non-coding RNA gene	Chr4:106884924-106885249 (-)
DBA/2J	ENSMUSG00185050999	unclassified non-coding RNA gene	Chr4:107595471-107595796 (-)
FVB/NJ	ENSMUSG00205043418	unclassified non-coding RNA gene	Chr4:105747041-105747366 (-)
JF1/MsJ	ENSUMUG00000048262	unclassified non-coding RNA gene	Chr4:107547676-107548018 (-)
LP/J	ENSMUSG00230009447	unclassified non-coding RNA gene	Chr4:110915506-110915831 (-)
NOD/ShiLtJ	ENSMUSG00190048691	unclassified non-coding RNA gene	Chr4:106254386-106254711 (-)
NZO/HlLtJ	ENSMUSG00225011475	unclassified non-coding RNA gene	Chr4:116031631-116031939 (-)
PWK/PhJ	ENSLUMG00010048090	unclassified non-coding RNA gene	Chr4:105269343-105269668 (-)
SPRET/EiJ	ENSMSPG00010030858	unclassified non-coding RNA gene	Chr4:107504313-107504621 (-)
WSB/EiJ	ENSIUOG00005045376	unclassified non-coding RNA gene	Chr4:106497463-106497788 (-)

Homology

• Gene Tree
  Gm55392
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Genomic Mutations
  1 involving Gm55392
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076910 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076910	Ensembl Gene Model | MGI Sequence Detail	309	C57BL/6J
transcript	ENSMUST00020183030	Ensembl | MGI Sequence Detail	309	Not Applicable

References

• Summaries
  All 3

  Phenotypes 2
• Earliest
  J:262448 Narita T, et al., Mice lacking all of the Skint family genes. Int Immunol. 2018 Apr 26;
• Latest
  J:323863 McKenzie DR, et al., Normality sensing licenses local T cells for innate-like tissue surveillance. Nat Immunol. 2022 Mar;23(3):411-422