Gm55382 Gene Detail

Summary

• Symbol
  Gm55382
• Name
  predicted gene, 55382

• Feature Type
  miRNA gene
• IDs
  MGI:6847235
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:99975363-99975472 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  49 from dbSNP Build 142
• Strain Annotations
  37

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847235	miRNA gene	Chr10:99975363-99975472 (+)
129S1/SvImJ	ENSMUSG00200034181	miRNA gene	ChrX:129982154-129982263 (+)
129S1/SvImJ	ENSMUSG00200020459	miRNA gene	Chr10:96487744-96487853 (+)
A/J	ENSMUSG00195016541	miRNA gene	Chr10:96918944-96919053 (+)
A/J	ENSMUSG00195039341	miRNA gene	ChrX:135082747-135082856 (+)
AKR/J	no annotation
BALB/cJ	ENSMUSG00180010938	miRNA gene	Chr12:17153573-17153682 (-)
BALB/cJ	ENSMUSG00180009901	miRNA gene	Chr10:96926561-96926670 (+)
BALB/cJ	ENSMUSG00180001229	miRNA gene	Chr1:22145813-22145922 (-)
BALB/cJ	ENSMUSG00180001228	miRNA gene	Chr1:22141604-22141713 (-)
BALB/cJ	ENSMUSG00180042381	miRNA gene	ChrX:130452722-130452831 (+)
C3H/HeJ	no annotation
C57BL/6NJ	ENSMUSG00215007446	miRNA gene	Chr10:96510231-96510340 (+)
C57BL/6NJ	ENSMUSG00215041605	miRNA gene	Chr13:58188947-58189056 (-)
C57BL/6NJ	ENSMUSG00215044062	miRNA gene	Chr17:14531021-14531130 (-)
C57BL/6NJ	ENSMUSG00215044067	miRNA gene	Chr17:14535596-14535705 (-)
C57BL/6NJ	ENSMUSG00215033299	miRNA gene	Chr8:16139861-16139970 (+)
C57BL/6NJ	ENSMUSG00215033254	miRNA gene	Chr8:16136652-16136761 (+)
C57BL/6NJ	ENSMUSG00215032961	miRNA gene	ChrX:130821494-130821603 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	ENSMUSG00185046864	miRNA gene	ChrX:147298380-147298489 (+)
DBA/2J	ENSMUSG00185020019	miRNA gene	Chr10:96868641-96868750 (+)
DBA/2J	ENSMUSG00185018929	miRNA gene	Chr13:59234696-59234805 (-)
DBA/2J	ENSMUSG00185004461	miRNA gene	Chr12:17671673-17671782 (-)
FVB/NJ	no annotation
JF1/MsJ	no annotation
LP/J	ENSMUSG00230036512	miRNA gene	Chr13:68599459-68599568 (-)
LP/J	ENSMUSG00230023251	miRNA gene	Chr12:19964019-19964128 (-)
LP/J	ENSMUSG00230014707	miRNA gene	ChrX:154081747-154081856 (+)
LP/J	ENSMUSG00230008020	miRNA gene	Chr12:24638375-24638484 (-)
LP/J	ENSMUSG00230023235	miRNA gene	Chr12:19722963-19723072 (-)
LP/J	ENSMUSG00230022704	miRNA gene	Chr10:98787202-98787311 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225042845	miRNA gene	Chr8:26100069-26100178 (+)
NZO/HlLtJ	ENSMUSG00225035163	miRNA gene	Chr12:22166167-22166276 (-)
NZO/HlLtJ	ENSMUSG00225035128	miRNA gene	Chr12:21826998-21827107 (-)
NZO/HlLtJ	ENSMUSG00225042916	miRNA gene	ChrX:157512312-157512421 (+)
NZO/HlLtJ	ENSMUSG00225040792	miRNA gene	Chr10:103018164-103018273 (+)
NZO/HlLtJ	ENSMUSG00225042853	miRNA gene	Chr8:26103278-26103387 (+)
NZO/HlLtJ	ENSMUSG00225048363	miRNA gene	Chr13:62285138-62285247 (-)
NZO/HlLtJ	ENSMUSG00225029941	miRNA gene	Chr12:66066120-66066229 (+)
NZO/HlLtJ	ENSMUSG00225035370	miRNA gene	Chr12:26821482-26821591 (-)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010010448	miRNA gene	Chr10:98278882-98278958 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm55382
  

Sequences &
Gene Models

• All Sequences
  39

• Ensembl
  ENSMUSG00002075807 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075807	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020183394	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;